Clone: 1367792136965469 D10

Tagged gene: synj
Identifier: FBgn0034691

Clone FlyFos023109(pRedFlp-Hgr)(synj[37431]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
17946409 17948215 11435 13241 - gene CG13501 coding_transcript
17948458 17957262 13484 22288 + gene Snp coding_transcript
17957230 17958791 22256 23817 - gene CG11475 coding_transcript
17958739 17960948 23765 25974 - gene CG11474 coding_transcript
17961043 17962842 26069 27868 - gene CG2921 coding_transcript
17963547 17966886 28573 31912 + gene GlcT-1 coding_transcript
17967663 17973272 32689 39360 + gene synj coding_transcript
17967663 17972926 32689 39014 + mrna FBtr0071756 coding_transcript
17967663 17967710 32689 32736 + exon coding_transcript
17967663 17967710 32689 32736 + five_prime_utr coding_transcript
17967711 17968579 32737 33605 + intron coding_transcript
17967948 17973272 32974 39360 + mrna FBtr0071757 coding_transcript
17967948 17968043 32974 33069 + exon coding_transcript
17967948 17968043 32974 33069 + five_prime_utr coding_transcript
17968044 17968579 33070 33605 + intron coding_transcript
17968190 17973272 33216 39360 + mrna FBtr0308239 coding_transcript
17968190 17968268 33216 33294 + exon coding_transcript
17968190 17968268 33216 33294 + five_prime_utr coding_transcript
17968269 17968579 33295 33605 + intron coding_transcript
17968580 17970142 33606 35168 + exon coding_transcript
17968580 17970142 33606 35168 + exon coding_transcript
17968580 17970142 33606 35168 + exon coding_transcript
17968580 17968684 33606 33710 + five_prime_utr coding_transcript
17968580 17968684 33606 33710 + five_prime_utr coding_transcript
17968580 17968684 33606 33710 + five_prime_utr coding_transcript
17968685 17970142 33711 35168 + cds coding_transcript
17968685 17970142 33711 35168 + cds coding_transcript
17968685 17970142 33711 35168 + cds coding_transcript
17970143 17970209 35169 35235 + intron coding_transcript
17970143 17970209 35169 35235 + intron coding_transcript
17970143 17970209 35169 35235 + intron coding_transcript
17970210 17972429 35236 38517 + exon coding_transcript
17970210 17972429 35236 38517 + exon coding_transcript
17970210 17972429 35236 38517 + exon coding_transcript
17970210 17972408 35236 38496 + cds coding_transcript
17970210 17972408 35236 38496 + cds coding_transcript
17970210 17972408 35236 38496 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 37432 37491 + cds 2xTY1 CLC
1548 2264 37498 38214 + cds SGFP CLC
2271 2312 38221 38262 + cds V5 CLC
2313 2336 38263 38286 + cds Precision cut site CLC
2337 2357 38287 38307 + cds TEV CLC
2358 2429 38308 38379 + cds BLRP CLC
3813 3846 38387 38420 + misc_recomb FRT CLC
dmel-5.43-2R
17972409 17972429 38497 38517 + three_prime_utr coding_transcript
17972409 17972429 38497 38517 + three_prime_utr coding_transcript
17972409 17972429 38497 38517 + three_prime_utr coding_transcript
17972430 17972496 38518 38584 + intron coding_transcript
17972430 17972496 38518 38584 + intron coding_transcript
17972430 17972496 38518 38584 + intron coding_transcript
17972497 17973272 38585 39360 + exon coding_transcript
17972497 17973272 38585 39360 + three_prime_utr coding_transcript
17972497 17973272 38585 39360 + exon coding_transcript
17972497 17973272 38585 39360 + three_prime_utr coding_transcript
17972497 17972926 38585 39014 + exon coding_transcript
17972497 17972926 38585 39014 + three_prime_utr coding_transcript
17973174 17976084 39262 42172 - gene CG13502 coding_transcript
17976928 17978760 43016 44848 - gene CG43393 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
synj[37431]::S000169_fly_pretag_fwd
CAAATAGGAGCGGCAATGCTCCACCGCTGCCCACGCGACCCGCCAACAACgaagtgcataccaatcaggacccgc
fasta Fasta
synj[37431]::S000169_fly_pretag_rev
TGATATTTCTTGAATTCTTAACCAACCCCGTGTGCGTAGCCTGCAGCTCActtgtcgtcgtcatccttgtagtca
fasta Fasta