Clone: 1367792136965469 D10
Tagged gene: synj
Identifier: FBgn0034691
Clone | FlyFos023109(pRedFlp-Hgr)(synj[37431]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
17946409 | 17948215 | 11435 | 13241 | - | gene | CG13501 | coding_transcript | |
17948458 | 17957262 | 13484 | 22288 | + | gene | Snp | coding_transcript | |
17957230 | 17958791 | 22256 | 23817 | - | gene | CG11475 | coding_transcript | |
17958739 | 17960948 | 23765 | 25974 | - | gene | CG11474 | coding_transcript | |
17961043 | 17962842 | 26069 | 27868 | - | gene | CG2921 | coding_transcript | |
17963547 | 17966886 | 28573 | 31912 | + | gene | GlcT-1 | coding_transcript | |
17967663 | 17973272 | 32689 | 39360 | + | gene | synj | coding_transcript | |
17967663 | 17972926 | 32689 | 39014 | + | mrna | FBtr0071756 | coding_transcript | |
17967663 | 17967710 | 32689 | 32736 | + | exon | coding_transcript | ||
17967663 | 17967710 | 32689 | 32736 | + | five_prime_utr | coding_transcript | ||
17967711 | 17968579 | 32737 | 33605 | + | intron | coding_transcript | ||
17967948 | 17973272 | 32974 | 39360 | + | mrna | FBtr0071757 | coding_transcript | |
17967948 | 17968043 | 32974 | 33069 | + | exon | coding_transcript | ||
17967948 | 17968043 | 32974 | 33069 | + | five_prime_utr | coding_transcript | ||
17968044 | 17968579 | 33070 | 33605 | + | intron | coding_transcript | ||
17968190 | 17973272 | 33216 | 39360 | + | mrna | FBtr0308239 | coding_transcript | |
17968190 | 17968268 | 33216 | 33294 | + | exon | coding_transcript | ||
17968190 | 17968268 | 33216 | 33294 | + | five_prime_utr | coding_transcript | ||
17968269 | 17968579 | 33295 | 33605 | + | intron | coding_transcript | ||
17968580 | 17970142 | 33606 | 35168 | + | exon | coding_transcript | ||
17968580 | 17970142 | 33606 | 35168 | + | exon | coding_transcript | ||
17968580 | 17970142 | 33606 | 35168 | + | exon | coding_transcript | ||
17968580 | 17968684 | 33606 | 33710 | + | five_prime_utr | coding_transcript | ||
17968580 | 17968684 | 33606 | 33710 | + | five_prime_utr | coding_transcript | ||
17968580 | 17968684 | 33606 | 33710 | + | five_prime_utr | coding_transcript | ||
17968685 | 17970142 | 33711 | 35168 | + | cds | coding_transcript | ||
17968685 | 17970142 | 33711 | 35168 | + | cds | coding_transcript | ||
17968685 | 17970142 | 33711 | 35168 | + | cds | coding_transcript | ||
17970143 | 17970209 | 35169 | 35235 | + | intron | coding_transcript | ||
17970143 | 17970209 | 35169 | 35235 | + | intron | coding_transcript | ||
17970143 | 17970209 | 35169 | 35235 | + | intron | coding_transcript | ||
17970210 | 17972429 | 35236 | 38517 | + | exon | coding_transcript | ||
17970210 | 17972429 | 35236 | 38517 | + | exon | coding_transcript | ||
17970210 | 17972429 | 35236 | 38517 | + | exon | coding_transcript | ||
17970210 | 17972408 | 35236 | 38496 | + | cds | coding_transcript | ||
17970210 | 17972408 | 35236 | 38496 | + | cds | coding_transcript | ||
17970210 | 17972408 | 35236 | 38496 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 37432 | 37491 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 37498 | 38214 | + | cds | SGFP | CLC | |
2271 | 2312 | 38221 | 38262 | + | cds | V5 | CLC | |
2313 | 2336 | 38263 | 38286 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 38287 | 38307 | + | cds | TEV | CLC | |
2358 | 2429 | 38308 | 38379 | + | cds | BLRP | CLC | |
3813 | 3846 | 38387 | 38420 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2R | ||||||||
17972409 | 17972429 | 38497 | 38517 | + | three_prime_utr | coding_transcript | ||
17972409 | 17972429 | 38497 | 38517 | + | three_prime_utr | coding_transcript | ||
17972409 | 17972429 | 38497 | 38517 | + | three_prime_utr | coding_transcript | ||
17972430 | 17972496 | 38518 | 38584 | + | intron | coding_transcript | ||
17972430 | 17972496 | 38518 | 38584 | + | intron | coding_transcript | ||
17972430 | 17972496 | 38518 | 38584 | + | intron | coding_transcript | ||
17972497 | 17973272 | 38585 | 39360 | + | exon | coding_transcript | ||
17972497 | 17973272 | 38585 | 39360 | + | three_prime_utr | coding_transcript | ||
17972497 | 17973272 | 38585 | 39360 | + | exon | coding_transcript | ||
17972497 | 17973272 | 38585 | 39360 | + | three_prime_utr | coding_transcript | ||
17972497 | 17972926 | 38585 | 39014 | + | exon | coding_transcript | ||
17972497 | 17972926 | 38585 | 39014 | + | three_prime_utr | coding_transcript | ||
17973174 | 17976084 | 39262 | 42172 | - | gene | CG13502 | coding_transcript | |
17976928 | 17978760 | 43016 | 44848 | - | gene | CG43393 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
synj[37431]::S000169_fly_pretag_fwd
CAAATAGGAGCGGCAATGCTCCACCGCTGCCCACGCGACCCGCCAACAACgaagtgcataccaatcaggacccgc
|
Fasta |
synj[37431]::S000169_fly_pretag_rev
TGATATTTCTTGAATTCTTAACCAACCCCGTGTGCGTAGCCTGCAGCTCActtgtcgtcgtcatccttgtagtca
|
Fasta |