Clone: 1367792136965469 C10
Tagged gene: CG11474
Identifier: FBgn0034688
Clone | FlyFos023109(pRedFlp-Hgr)(CG11474[24089]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
17946409 | 17948215 | 11435 | 13241 | - | gene | CG13501 | coding_transcript | |
17948458 | 17957262 | 13484 | 22288 | + | gene | Snp | coding_transcript | |
17957230 | 17958791 | 22256 | 23817 | - | gene | CG11475 | coding_transcript | |
17958739 | 17960948 | 23765 | 27036 | - | gene | CG11474 | coding_transcript | |
17958739 | 17960948 | 23765 | 27036 | - | mrna | FBtr0303766 | coding_transcript | |
17958739 | 17959212 | 23765 | 25300 | - | exon | coding_transcript | ||
17958739 | 17959060 | 23765 | 24086 | - | three_prime_utr | coding_transcript | ||
17958920 | 17960948 | 23946 | 27036 | - | mrna | FBtr0071802 | coding_transcript | |
17958920 | 17959212 | 23946 | 25300 | - | exon | coding_transcript | ||
17958920 | 17959060 | 23946 | 24086 | - | three_prime_utr | coding_transcript | ||
17959061 | 17959212 | 24087 | 25300 | - | cds | coding_transcript | ||
17959061 | 17959212 | 24087 | 25300 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 24163 | 24196 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 24204 | 24275 | - | cds | BLRP | CLC | |
2337 | 2357 | 24276 | 24296 | - | cds | TEV | CLC | |
2313 | 2336 | 24297 | 24320 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 24321 | 24362 | - | cds | V5 | CLC | |
1548 | 2264 | 24369 | 25085 | - | cds | SGFP | CLC | |
1482 | 1541 | 25092 | 25151 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
17959213 | 17959270 | 25301 | 25358 | - | intron | coding_transcript | ||
17959213 | 17959270 | 25301 | 25358 | - | intron | coding_transcript | ||
17959271 | 17960137 | 25359 | 26225 | - | exon | coding_transcript | ||
17959271 | 17960137 | 25359 | 26225 | - | cds | coding_transcript | ||
17959271 | 17960137 | 25359 | 26225 | - | exon | coding_transcript | ||
17959271 | 17960137 | 25359 | 26225 | - | cds | coding_transcript | ||
17960138 | 17960302 | 26226 | 26390 | - | intron | coding_transcript | ||
17960138 | 17960302 | 26226 | 26390 | - | intron | coding_transcript | ||
17960303 | 17960399 | 26391 | 26487 | - | exon | coding_transcript | ||
17960303 | 17960399 | 26391 | 26487 | - | cds | coding_transcript | ||
17960303 | 17960399 | 26391 | 26487 | - | exon | coding_transcript | ||
17960303 | 17960399 | 26391 | 26487 | - | cds | coding_transcript | ||
17960400 | 17960466 | 26488 | 26554 | - | intron | coding_transcript | ||
17960400 | 17960466 | 26488 | 26554 | - | intron | coding_transcript | ||
17960467 | 17960572 | 26555 | 26660 | - | exon | coding_transcript | ||
17960467 | 17960572 | 26555 | 26660 | - | cds | coding_transcript | ||
17960467 | 17960572 | 26555 | 26660 | - | exon | coding_transcript | ||
17960467 | 17960572 | 26555 | 26660 | - | cds | coding_transcript | ||
17960573 | 17960716 | 26661 | 26804 | - | intron | coding_transcript | ||
17960573 | 17960716 | 26661 | 26804 | - | intron | coding_transcript | ||
17960717 | 17960948 | 26805 | 27036 | - | exon | coding_transcript | ||
17960717 | 17960948 | 26805 | 27036 | - | exon | coding_transcript | ||
17960717 | 17960805 | 26805 | 26893 | - | cds | coding_transcript | ||
17960717 | 17960805 | 26805 | 26893 | - | cds | coding_transcript | ||
17960806 | 17960948 | 26894 | 27036 | - | five_prime_utr | coding_transcript | ||
17960806 | 17960948 | 26894 | 27036 | - | five_prime_utr | coding_transcript | ||
17961043 | 17962842 | 27131 | 28930 | - | gene | CG2921 | coding_transcript | |
17963547 | 17966886 | 29635 | 32974 | + | gene | GlcT-1 | coding_transcript | |
17967663 | 17973272 | 33751 | 39360 | + | gene | synj | coding_transcript | |
17973174 | 17976084 | 39262 | 42172 | - | gene | CG13502 | coding_transcript | |
17976928 | 17978760 | 43016 | 44848 | - | gene | CG43393 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG11474[24089]::S000169_fly_pretag_rev
AACAATTCAACTAGTTTGCTGTTCCTTGTCCTGATTTCCTTCTTTCTCTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG11474[24089]::S000169_fly_pretag_fwd
AGGAGTGGATGTTGACTGGCGAGTATGGCGTAATACAGTTTGCCAGCAAGgaagtgcataccaatcaggacccgc
|
Fasta |