Clone: 1367792136965469 E09

Tagged gene: Syx13
Identifier: FBgn0036341

Clone FlyFos023104(pRedFlp-Hgr)(Syx13[35689]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
13016456 13017862 12653 14059 + gene RpS12 coding_transcript
13017863 13019537 14060 15734 - gene CG11253 coding_transcript
13022064 13029537 18261 25734 + gene CG17672 coding_transcript
13029926 13034076 26123 30273 + gene SRm160 coding_transcript
13034856 13037012 31053 33209 + gene RpS4 coding_transcript
13037536 13040001 33733 37260 + gene Syx13 coding_transcript
13037536 13040001 33733 37260 + mrna FBtr0075886 coding_transcript
13037536 13037665 33733 33862 + exon coding_transcript
13037536 13037665 33733 33862 + five_prime_utr coding_transcript
13037666 13038017 33863 34214 + intron coding_transcript
13038018 13038695 34215 34892 + exon coding_transcript
13038018 13038019 34215 34216 + five_prime_utr coding_transcript
13038020 13038695 34217 34892 + cds coding_transcript
13038696 13039316 34893 35513 + intron coding_transcript
13039317 13040001 35514 37260 + exon coding_transcript
13039317 13039495 35514 36754 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 35690 35749 + cds 2xTY1 CLC
1548 2264 35756 36472 + cds SGFP CLC
2271 2312 36479 36520 + cds V5 CLC
2313 2336 36521 36544 + cds Precision cut site CLC
2337 2357 36545 36565 + cds TEV CLC
2358 2429 36566 36637 + cds BLRP CLC
3813 3846 36645 36678 + misc_recomb FRT CLC
dmel-5.43-3L
13039496 13040001 36755 37260 + three_prime_utr coding_transcript
13040124 13040623 37383 37882 + gene CG11279 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Syx13[35689]::S000169_fly_pretag_rev
TGTATGTTTGCGTGTGTTTGTTGAATATGGGCGTAAAAATAAAACAATTActtgtcgtcgtcatccttgtagtca
fasta Fasta
Syx13[35689]::S000169_fly_pretag_fwd
TGATAATAGGTTTAATCGTAACTGGCGTTATCGTTGCCAAACTGAACAGTgaagtgcataccaatcaggacccgc
fasta Fasta