Clone: 1367792136965469 C08
Tagged gene: CG33108
Identifier: FBgn0053108
Clone | FlyFos023094(pRedFlp-Hgr)(CG33108[40480]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
19810935 | 19812291 | 28202 | 29558 | - | gene | CG13603 | coding_transcript | |
19812362 | 19814460 | 29629 | 31727 | + | gene | CG5902 | coding_transcript | |
19814528 | 19818638 | 31795 | 35905 | - | gene | CG13604 | coding_transcript | |
19818734 | 19821174 | 36001 | 38441 | + | gene | Rab7 | coding_transcript | |
19821392 | 19823266 | 38659 | 41595 | + | gene | CG33108 | coding_transcript | |
19821392 | 19822170 | 38659 | 39437 | + | mrna | FBtr0300647 | coding_transcript | |
19821392 | 19821688 | 38659 | 38955 | + | exon | coding_transcript | ||
19821392 | 19821457 | 38659 | 38724 | + | five_prime_utr | coding_transcript | ||
19821393 | 19823266 | 38660 | 41595 | + | mrna | FBtr0084504 | coding_transcript | |
19821393 | 19821688 | 38660 | 38955 | + | exon | coding_transcript | ||
19821393 | 19821457 | 38660 | 38724 | + | five_prime_utr | coding_transcript | ||
19821458 | 19821688 | 38725 | 38955 | + | cds | coding_transcript | ||
19821458 | 19821688 | 38725 | 38955 | + | cds | coding_transcript | ||
19821689 | 19821753 | 38956 | 39020 | + | intron | coding_transcript | ||
19821689 | 19821753 | 38956 | 39020 | + | intron | coding_transcript | ||
19821754 | 19822170 | 39021 | 39437 | + | exon | coding_transcript | ||
19821754 | 19822065 | 39021 | 39332 | + | cds | coding_transcript | ||
19821754 | 19822001 | 39021 | 39268 | + | exon | coding_transcript | ||
19821754 | 19822001 | 39021 | 39268 | + | cds | coding_transcript | ||
19821984 | 19822739 | 39251 | 40006 | + | gene | LSm3 | coding_transcript | |
19821984 | 19822739 | 39251 | 40006 | + | mrna | FBtr0084505 | coding_transcript | |
19821984 | 19822260 | 39251 | 39527 | + | exon | coding_transcript | ||
19821984 | 19822239 | 39251 | 39506 | + | five_prime_utr | coding_transcript | ||
19822002 | 19822833 | 39269 | 40100 | + | intron | coding_transcript | ||
19822066 | 19822170 | 39333 | 39437 | + | three_prime_utr | coding_transcript | ||
19822138 | 19822739 | 39405 | 40006 | + | mrna | FBtr0300648 | coding_transcript | |
19822138 | 19822260 | 39405 | 39527 | + | exon | coding_transcript | ||
19822138 | 19822239 | 39405 | 39506 | + | five_prime_utr | coding_transcript | ||
19822240 | 19822260 | 39507 | 39527 | + | cds | coding_transcript | ||
19822240 | 19822260 | 39507 | 39527 | + | cds | coding_transcript | ||
19822261 | 19822313 | 39528 | 39580 | + | intron | coding_transcript | ||
19822261 | 19822313 | 39528 | 39580 | + | intron | coding_transcript | ||
19822314 | 19822427 | 39581 | 39694 | + | exon | coding_transcript | ||
19822314 | 19822427 | 39581 | 39694 | + | cds | coding_transcript | ||
19822314 | 19822427 | 39581 | 39694 | + | exon | coding_transcript | ||
19822314 | 19822427 | 39581 | 39694 | + | cds | coding_transcript | ||
19822428 | 19822487 | 39695 | 39754 | + | intron | coding_transcript | ||
19822428 | 19822487 | 39695 | 39754 | + | intron | coding_transcript | ||
19822488 | 19822739 | 39755 | 40006 | + | exon | coding_transcript | ||
19822488 | 19822739 | 39755 | 40006 | + | exon | coding_transcript | ||
19822488 | 19822664 | 39755 | 39931 | + | cds | coding_transcript | ||
19822488 | 19822664 | 39755 | 39931 | + | cds | coding_transcript | ||
19822665 | 19822739 | 39932 | 40006 | + | three_prime_utr | coding_transcript | ||
19822665 | 19822739 | 39932 | 40006 | + | three_prime_utr | coding_transcript | ||
19822834 | 19822930 | 40101 | 40197 | + | exon | coding_transcript | ||
19822834 | 19822930 | 40101 | 40197 | + | cds | coding_transcript | ||
19822931 | 19822988 | 40198 | 40255 | + | intron | coding_transcript | ||
19822989 | 19823266 | 40256 | 41595 | + | exon | coding_transcript | ||
19822989 | 19823216 | 40256 | 41545 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 40481 | 40540 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 40547 | 41263 | + | cds | SGFP | CLC | |
2271 | 2312 | 41270 | 41311 | + | cds | V5 | CLC | |
2313 | 2336 | 41312 | 41335 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 41336 | 41356 | + | cds | TEV | CLC | |
2358 | 2429 | 41357 | 41428 | + | cds | BLRP | CLC | |
3813 | 3846 | 41436 | 41469 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3R | ||||||||
19823217 | 19823266 | 41546 | 41595 | + | three_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
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CG33108[40480]::S000169_fly_pretag_rev
AATTAAAAAAGGTTTTTTTTATTGAAAATATTTCGATGCACATATATTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG33108[40480]::S000169_fly_pretag_fwd
GCATTCTTGTCAACGGGCTGCCAAAGCAGGTGATTCATGTTCGCTGGTCCgaagtgcataccaatcaggacccgc
|
Fasta |