Clone: 1367792136965469 G05
Tagged gene: CG1311
Identifier: FBgn0035523
Clone | FlyFos023070(pRedFlp-Hgr)(CG1311[20212]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
4288642 | 4291211 | 10345 | 12914 | - | gene | Hexo1 | coding_transcript | |
4287038 | 4288349 | 13207 | 14518 | - | gene | TfIIEbeta | coding_transcript | |
4283855 | 4286865 | 14691 | 17701 | - | gene | CG1316 | coding_transcript | |
4283068 | 4283478 | 18078 | 18488 | + | gene | srw | coding_transcript | |
4281504 | 4282798 | 18758 | 20052 | + | gene | CG11583 | coding_transcript | |
4277964 | 4281618 | 19938 | 24654 | - | gene | CG1311 | coding_transcript | |
4277964 | 4281618 | 19938 | 24654 | - | mrna | FBtr0073232 | coding_transcript | |
4281116 | 4281618 | 19938 | 21502 | - | exon | coding_transcript | ||
4281347 | 4281618 | 19938 | 20209 | - | three_prime_utr | coding_transcript | ||
4281504 | 4281597 | 19959 | 20052 | + | three_prime_utr | coding_transcript | ||
4281116 | 4281346 | 20210 | 21502 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 20286 | 20319 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 20327 | 20398 | - | cds | BLRP | CLC | |
2337 | 2357 | 20399 | 20419 | - | cds | TEV | CLC | |
2313 | 2336 | 20420 | 20443 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 20444 | 20485 | - | cds | V5 | CLC | |
1548 | 2264 | 20492 | 21208 | - | cds | SGFP | CLC | |
1482 | 1541 | 21215 | 21274 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3L | ||||||||
4281059 | 4281115 | 21503 | 21559 | - | intron | coding_transcript | ||
4280837 | 4281058 | 21560 | 21781 | - | exon | coding_transcript | ||
4280837 | 4281058 | 21560 | 21781 | - | cds | coding_transcript | ||
4280775 | 4280836 | 21782 | 21843 | - | intron | coding_transcript | ||
4280612 | 4280774 | 21844 | 22006 | - | exon | coding_transcript | ||
4280612 | 4280774 | 21844 | 22006 | - | cds | coding_transcript | ||
4280546 | 4280611 | 22007 | 22072 | - | intron | coding_transcript | ||
4280266 | 4280545 | 22073 | 22352 | - | exon | coding_transcript | ||
4280266 | 4280545 | 22073 | 22352 | - | cds | coding_transcript | ||
4279982 | 4280265 | 22353 | 22636 | - | intron | coding_transcript | ||
4279681 | 4279981 | 22637 | 22937 | - | exon | coding_transcript | ||
4279681 | 4279981 | 22637 | 22937 | - | cds | coding_transcript | ||
4279625 | 4279680 | 22938 | 22993 | - | intron | coding_transcript | ||
4279395 | 4279624 | 22994 | 23223 | - | exon | coding_transcript | ||
4279395 | 4279624 | 22994 | 23223 | - | cds | coding_transcript | ||
4279340 | 4279394 | 23224 | 23278 | - | intron | coding_transcript | ||
4279185 | 4279339 | 23279 | 23433 | - | exon | coding_transcript | ||
4279185 | 4279339 | 23279 | 23433 | - | cds | coding_transcript | ||
4279118 | 4279184 | 23434 | 23500 | - | intron | coding_transcript | ||
4278741 | 4279117 | 23501 | 23877 | - | exon | coding_transcript | ||
4278741 | 4279117 | 23501 | 23877 | - | cds | coding_transcript | ||
4278251 | 4278740 | 23878 | 24367 | - | intron | coding_transcript | ||
4277964 | 4278250 | 24368 | 24654 | - | exon | coding_transcript | ||
4278134 | 4278250 | 24368 | 24484 | - | cds | coding_transcript | ||
4277964 | 4278133 | 24485 | 24654 | - | five_prime_utr | coding_transcript | ||
4263721 | 4277782 | 24836 | 38897 | - | gene | CG1273 | coding_transcript | |
4266789 | 4267503 | 35115 | 35829 | + | gene | CG33764 | coding_transcript | |
4262700 | 4263464 | 39154 | 39918 | - | gene | VhaM9.7-a | coding_transcript | |
4261298 | 4262461 | 40157 | 41320 | + | gene | CG11586 | coding_transcript | |
4259419 | 4261649 | 40969 | 43199 | - | gene | CG1309 | coding_transcript | |
4255991 | 4259152 | 43466 | 46627 | + | gene | CG15011 | coding_transcript | |
4254774 | 4256053 | 46565 | 47844 | - | gene | CG1265 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG1311[20212]::S000169_fly_pretag_rev
TCTGCGCTTGGAATACAAAAGCGAAAGCATCTAGCTGCGTCTTAGAACTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG1311[20212]::S000169_fly_pretag_fwd
TTACCCGACTCCCTCAGTCCGATCCCGAGGTAGCTCCCATGTCGGCGGATgaagtgcataccaatcaggacccgc
|
Fasta |