Clone: 1367792136965469 E04

Tagged gene: Cda9
Identifier: FBgn0034197

Clone FlyFos023045(pRedFlp-Hgr)(Cda9[22747]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
13028000 13028384 12110 12494 + gene CG43107 coding_transcript
13026956 13027430 13064 13538 + gene CG43103 coding_transcript
13024746 13026337 14157 15748 - gene CG11395 coding_transcript
13023962 13024408 16086 16532 - gene CG15917 coding_transcript
13021662 13022357 18137 18832 - gene CG11400 coding_transcript
13020963 13021255 19239 19531 - gene Acp54A1 coding_transcript
13016338 13017839 22655 25218 - gene Cda9 coding_transcript
13016338 13017839 22655 25218 - mrna FBtr0086984 coding_transcript
13017500 13017839 22655 24056 - exon coding_transcript
13017750 13017839 22655 22744 - three_prime_utr coding_transcript
13017500 13017749 22745 24056 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 22821 22854 - misc_recomb FRT CLC
2358 2429 22862 22933 - cds BLRP CLC
2337 2357 22934 22954 - cds TEV CLC
2313 2336 22955 22978 - cds Precision cut site CLC
2271 2312 22979 23020 - cds V5 CLC
1548 2264 23027 23743 - cds SGFP CLC
1482 1541 23750 23809 - cds 2xTY1 CLC
dmel-5.43-2R
13017388 13017499 24057 24168 - intron coding_transcript
13016663 13017387 24169 24893 - exon coding_transcript
13016663 13017387 24169 24893 - cds coding_transcript
13016557 13016662 24894 24999 - intron coding_transcript
13016338 13016556 25000 25218 - exon coding_transcript
13016338 13016556 25000 25218 - cds coding_transcript
13013912 13014528 27028 27644 + gene CG15605 coding_transcript
13012267 13013887 27669 29289 - gene Amy-d coding_transcript
13010398 13011742 29814 31158 + gene Spn53F coding_transcript
13006211 13007808 33748 35345 + gene Amy-p coding_transcript
12996352 13001866 39690 45204 - gene CG15611 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Cda9[22747]::S000169_fly_pretag_fwd
AGTGCCCGTCCGTCTATCCCTGGCTGGACAATCCTCTGGGTCAGCAGCTCgaagtgcataccaatcaggacccgc
fasta Fasta
Cda9[22747]::S000169_fly_pretag_rev
TTTATTTTTTTCAGTGTACACGCTTTATGCGCGAATGTCTGGCGGGCTTActtgtcgtcgtcatccttgtagtca
fasta Fasta