Clone: 1367792136965469 F02

Tagged gene: pcs
Identifier: FBgn0033988

Clone FlyFos023003(pRedFlp-Hgr)(pcs[19347]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
10879837 10881336 16587 18086 + gene CG10265 coding_transcript
10875170 10879728 18195 23815 + gene CG7639 coding_transcript
10868782 10878841 19082 30203 - gene pcs coding_transcript
10868782 10878841 19082 30203 - mrna FBtr0301507 coding_transcript
10877428 10878841 19082 21557 - exon coding_transcript
10878579 10878841 19082 19344 - three_prime_utr coding_transcript
10877428 10878578 19345 21557 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 19421 19454 - misc_recomb FRT CLC
2358 2429 19462 19533 - cds BLRP CLC
2337 2357 19534 19554 - cds TEV CLC
2313 2336 19555 19578 - cds Precision cut site CLC
2271 2312 19579 19620 - cds V5 CLC
1548 2264 19627 20343 - cds SGFP CLC
1482 1541 20350 20409 - cds 2xTY1 CLC
dmel-5.43-2R
10877365 10877427 21558 21620 - intron coding_transcript
10877187 10877364 21621 21798 - exon coding_transcript
10877187 10877364 21621 21798 - cds coding_transcript
10877121 10877186 21799 21864 - intron coding_transcript
10877058 10877120 21865 21927 - exon coding_transcript
10877058 10877120 21865 21927 - cds coding_transcript
10869329 10877057 21928 29656 - intron coding_transcript
10876440 10876983 22002 22545 + exon coding_transcript
10876949 10876983 22002 22036 + five_prime_utr coding_transcript
10876440 10876948 22037 22545 + cds coding_transcript
10876379 10876439 22546 22606 + intron coding_transcript
10876267 10876378 22607 22718 + exon coding_transcript
10876267 10876378 22607 22718 + cds coding_transcript
10876207 10876266 22719 22778 + intron coding_transcript
10875648 10876206 22779 23337 + exon coding_transcript
10875648 10876206 22779 23337 + cds coding_transcript
10875589 10875647 23338 23396 + intron coding_transcript
10875170 10875588 23397 23815 + exon coding_transcript
10875437 10875588 23397 23548 + cds coding_transcript
10875170 10875436 23549 23815 + three_prime_utr coding_transcript
10868782 10869328 29657 30203 - exon coding_transcript
10869287 10869328 29657 29698 - cds coding_transcript
10868782 10869286 29699 30203 - five_prime_utr coding_transcript
10850819 10868089 30896 48166 - gene CG12424 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
pcs[19347]::S000169_fly_pretag_rev
GATATGGGGCTGGCTGAAGAAGTCTCCTCTGGCCCCCTAGTTGCTCACTActtgtcgtcgtcatccttgtagtca
fasta Fasta
pcs[19347]::S000169_fly_pretag_fwd
GTGCTGCTTTCGGCGGAGTGCGCAAGACGCTGCGTAGGCGCTCTCTGGAAgaagtgcataccaatcaggacccgc
fasta Fasta