Clone: 7882854381648677 H11

Tagged gene: HmgD
Identifier: FBgn0004362

Clone FlyFos021688(pRedFlp-Hgr)(HmgD[32406]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
17585056 17591993 14080 21017 - gene HmgZ coding_transcript
17596955 17599114 25979 28138 - gene CG30403 coding_transcript
17600836 17604230 29860 34316 + gene HmgD coding_transcript
17600836 17604230 29860 34316 + mrna FBtr0071708 coding_transcript
17600836 17604230 29860 34316 + mrna FBtr0071709 coding_transcript
17600836 17603872 29860 33958 + mrna FBtr0301410 coding_transcript
17600836 17600892 29860 29916 + exon coding_transcript
17600836 17600892 29860 29916 + five_prime_utr coding_transcript
17600836 17600892 29860 29916 + exon coding_transcript
17600836 17600892 29860 29916 + five_prime_utr coding_transcript
17600836 17600892 29860 29916 + exon coding_transcript
17600836 17600892 29860 29916 + five_prime_utr coding_transcript
17600893 17602910 29917 31934 + intron coding_transcript
17600893 17602910 29917 31934 + intron coding_transcript
17600893 17601464 29917 30488 + intron coding_transcript
17601465 17601671 30489 30695 + exon coding_transcript
17601465 17601671 30489 30695 + five_prime_utr coding_transcript
17601672 17602910 30696 31934 + intron coding_transcript
17602911 17603122 31935 32146 + exon coding_transcript
17602911 17603122 31935 32146 + exon coding_transcript
17602911 17603122 31935 32146 + exon coding_transcript
17602911 17602972 31935 31996 + five_prime_utr coding_transcript
17602911 17602972 31935 31996 + five_prime_utr coding_transcript
17602911 17602972 31935 31996 + five_prime_utr coding_transcript
17602973 17603122 31997 32146 + cds coding_transcript
17602973 17603122 31997 32146 + cds coding_transcript
17602973 17603122 31997 32146 + cds coding_transcript
17603123 17603196 32147 32220 + intron coding_transcript
17603123 17603196 32147 32220 + intron coding_transcript
17603123 17603196 32147 32220 + intron coding_transcript
17603197 17604230 32221 34316 + exon coding_transcript
17603197 17604230 32221 34316 + exon coding_transcript
17603197 17603872 32221 33958 + exon coding_transcript
17603197 17603385 32221 33471 + cds coding_transcript
17603197 17603385 32221 33471 + cds coding_transcript
17603197 17603385 32221 33471 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 32407 32466 + cds 2xTY1 CLC
1548 2264 32473 33189 + cds SGFP CLC
2271 2312 33196 33237 + cds V5 CLC
2313 2336 33238 33261 + cds Precision cut site CLC
2337 2357 33262 33282 + cds TEV CLC
2358 2429 33283 33354 + cds BLRP CLC
3813 3846 33362 33395 + misc_recomb FRT CLC
dmel-5.43-2R
17603386 17604230 33472 34316 + three_prime_utr coding_transcript
17603386 17604230 33472 34316 + three_prime_utr coding_transcript
17603386 17603872 33472 33958 + three_prime_utr coding_transcript
17604285 17607466 34371 37552 - gene Tango11 coding_transcript
17605338 17606337 35424 36423 + gene CG30398 coding_transcript
17608002 17611564 38088 41650 + gene LBR coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
HmgD[32406]::S000169_fly_pretag_rev
TGGTTGTGTGTGACTTGGTGATGGATTAGGGTGGGGGATGAGCCAGTCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
HmgD[32406]::S000169_fly_pretag_fwd
AGAAGAGCAAGAAGGAGGAGTCCGACGAGGACGACGATGATGAGAGCGAGgaagtgcataccaatcaggacccgc
 fasta Fasta