Clone: 7882854381648677 F05

Tagged gene: Ho
Identifier: FBgn0037933

Clone FlyFos021607(pRedFlp-Hgr)(Ho[41271]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
7537501 7538076 9787 10362 - gene CG14720 coding_transcript
7529346 7530662 17201 18517 - gene I-t coding_transcript
7526336 7528442 19421 21527 - gene CG14718 coding_transcript
7522231 7523384 24479 25632 - gene CG14717 coding_transcript
7519132 7519999 27864 28731 + gene Fer3 coding_transcript
7516107 7517521 30342 31756 + gene CG18765 coding_transcript
7514099 7515745 32118 33764 + gene CG6908 coding_transcript
7510391 7513852 34011 37472 + gene CG6834 coding_transcript
7506691 7510062 37801 41172 + gene CG6830 coding_transcript
7505481 7506698 41165 43444 - gene Ho coding_transcript
7505481 7506698 41165 43444 - mrna FBtr0082424 coding_transcript
7506367 7506698 41165 42558 - exon coding_transcript
7506595 7506698 41165 41268 - three_prime_utr coding_transcript
7506367 7506594 41269 42558 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 41345 41378 - misc_recomb FRT CLC
2358 2429 41386 41457 - cds BLRP CLC
2337 2357 41458 41478 - cds TEV CLC
2313 2336 41479 41502 - cds Precision cut site CLC
2271 2312 41503 41544 - cds V5 CLC
1548 2264 41551 42267 - cds SGFP CLC
1482 1541 42274 42333 - cds 2xTY1 CLC
dmel-5.43-3R
7506312 7506366 42559 42613 - intron coding_transcript
7505806 7506311 42614 43119 - exon coding_transcript
7505806 7506311 42614 43119 - cds coding_transcript
7505750 7505805 43120 43175 - intron coding_transcript
7505481 7505749 43176 43444 - exon coding_transcript
7505593 7505749 43176 43332 - cds coding_transcript
7505481 7505592 43333 43444 - five_prime_utr coding_transcript
7504099 7505408 43517 44826 + gene Taf12 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Ho[41271]::S000169_fly_pretag_rev
AATTCTAACTTGCTCAAGAGAGCTTACATTTGTATTTCCTACTTTTCTTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
Ho[41271]::S000169_fly_pretag_fwd
CACTAATCTTTGTTTCAAGTATTGTAGTGGCCGTGAAATTTGCTCTCAAGgaagtgcataccaatcaggacccgc
 fasta Fasta