Clone: 7882854381648677 E05

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Export Fasta GenBank GFF

Validation(click to hide details)

Type	Status	Download / View
Grows in selection	good
NGS-based tag validation	good	[view]

Genes in pFlyFos vector(click to hide details)

Gene		Clone relative			Genome relative
Name	Length	Start	End	Strand	Start	End	Strand
DsRed	716	8417	9132	+	8417	9132	+

Features(click to show details)

Start (Source)	End (Source)	Start	End	Strand	Type	Name	Source
pFlyFos
1	107	1	107	-	cds	LacZ	epicentre
4	21	4	21	-	primer_bind	CC2_rev	epicentre
310	593	310	593	+	misc_recomb	attB	epicentre
727	1386	727	1386	-	cds	Cat	epicentre
1605	1952	1605	1952	+	cds	redF	epicentre
2336	2953	2336	2953	+	rep_origin	oriV	epicentre
2953	3007	2953	3007	+	rep_origin	ori2	epicentre
3347	4102	3347	4102	+	cds	repE	epicentre
4681	5856	4681	5856	+	cds	parA	epicentre
5856	6827	5856	6827	+	cds	parB	epicentre
6900	7417	6900	7417	+	repeat_region	parC	epicentre
7633	8031	7633	8031	+	misc_binding	cos	epicentre
8049	8082	8049	8082	+	misc_recomb	loxP	epicentre
8182	8416	8182	8416	+	promoter	3xP3	epicentre
8417	9132	8417	9132	+	gene	DsRed	epicentre
8452	9132	8452	9132	+	cds	DsRed	epicentre
9284	9334	9284	9334	+	terminator	SV40	epicentre
9408	9630	9408	9630	-	cds	LacZ	epicentre
9559	9576	9559	9576	+	primer_bind	T7	epicentre
9610	9627	9610	9627	+	primer_bind	CC2_fwd	epicentre
dmel-5.43-3R
7537501	7538076	9787	10362	-	gene	CG14720	coding_transcript
7529346	7530662	17201	18517	-	gene	I-t	coding_transcript
7526336	7528442	19421	21527	-	gene	CG14718	coding_transcript
7522231	7523384	24479	25632	-	gene	CG14717	coding_transcript
7519132	7519999	27864	28731	+	gene	Fer3	coding_transcript
7516107	7517521	30342	31756	+	gene	CG18765	coding_transcript
7514099	7515745	32118	33764	+	gene	CG6908	coding_transcript
7510391	7513852	34011	38534	+	gene	CG6834	coding_transcript
7510391	7513852	34011	38534	+	mrna	FBtr0082438	coding_transcript
7513437	7513852	34011	34426	+	exon		coding_transcript
7513777	7513852	34011	34086	+	five_prime_utr		coding_transcript
7513437	7513776	34087	34426	+	cds		coding_transcript
7513148	7513436	34427	34715	+	intron		coding_transcript
7512633	7513147	34716	35230	+	exon		coding_transcript
7512633	7513147	34716	35230	+	cds		coding_transcript
7512576	7512632	35231	35287	+	intron		coding_transcript
7512016	7512575	35288	35847	+	exon		coding_transcript
7512016	7512575	35288	35847	+	cds		coding_transcript
7511962	7512015	35848	35901	+	intron		coding_transcript
7511735	7511961	35902	36128	+	exon		coding_transcript
7511735	7511961	35902	36128	+	cds		coding_transcript
7511684	7511734	36129	36179	+	intron		coding_transcript
7511193	7511683	36180	36670	+	exon		coding_transcript
7511193	7511683	36180	36670	+	cds		coding_transcript
7511125	7511192	36671	36738	+	intron		coding_transcript
7510758	7511124	36739	37105	+	exon		coding_transcript
7510758	7511124	36739	37105	+	cds		coding_transcript
7510701	7510757	37106	37162	+	intron		coding_transcript
7510391	7510700	37163	38534	+	exon		coding_transcript
7510513	7510700	37163	38412	+	cds		coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482	1541	37348	37407	+	cds	2xTY1	CLC
1548	2264	37414	38130	+	cds	SGFP	CLC
2271	2312	38137	38178	+	cds	V5	CLC
2313	2336	38179	38202	+	cds	Precision cut site	CLC
2337	2357	38203	38223	+	cds	TEV	CLC
2358	2429	38224	38295	+	cds	BLRP	CLC
3813	3846	38303	38336	+	misc_recomb	FRT	CLC
dmel-5.43-3R
7510391	7510512	38413	38534	+	three_prime_utr		coding_transcript
7506691	7510062	38863	42234	+	gene	CG6830	coding_transcript
7505481	7506698	42227	43444	-	gene	Ho	coding_transcript
7504099	7505408	43517	44826	+	gene	Taf12	coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence	Export
CG6834[37347]::S000169_fly_pretag_fwd ACGTGGAAAAGATTATGCCTTGGCTTAATAGGAGGGGTCTCCTCGATCCTgaagtgcataccaatcaggacccgc	Fasta
CG6834[37347]::S000169_fly_pretag_rev TCAACAAATCATTTATGCTTCATAATAACACATTTTTGCTAACTCCTTCActtgtcgtcgtcatccttgtagtca	Fasta