Clone: 1213189838248655 C12

Tagged gene: Acox57D-p
Identifier: FBgn0034628

Clone FlyFos019786(pRedFlp-Hgr)(Acox57D-p[38569]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
17270732 17271846 32668 33782 - gene CG10795 coding_transcript
17272060 17273720 33996 35656 - gene EfSec coding_transcript
17273859 17276788 35795 39786 + gene Acox57D-p coding_transcript
17273859 17276788 35795 39786 + mrna FBtr0071606 coding_transcript
17273859 17274328 35795 36264 + exon coding_transcript
17273859 17274186 35795 36122 + five_prime_utr coding_transcript
17274187 17274328 36123 36264 + cds coding_transcript
17274329 17274419 36265 36355 + intron coding_transcript
17274420 17274582 36356 36518 + exon coding_transcript
17274420 17274582 36356 36518 + cds coding_transcript
17274583 17274646 36519 36582 + intron coding_transcript
17274647 17274939 36583 36875 + exon coding_transcript
17274647 17274939 36583 36875 + cds coding_transcript
17274940 17275002 36876 36938 + intron coding_transcript
17275003 17275408 36939 37344 + exon coding_transcript
17275003 17275408 36939 37344 + cds coding_transcript
17275409 17275469 37345 37405 + intron coding_transcript
17275470 17276082 37406 38018 + exon coding_transcript
17275470 17276082 37406 38018 + cds coding_transcript
17276083 17276155 38019 38091 + intron coding_transcript
17276156 17276311 38092 38247 + exon coding_transcript
17276156 17276311 38092 38247 + cds coding_transcript
17276312 17276375 38248 38311 + intron coding_transcript
17276376 17276788 38312 39786 + exon coding_transcript
17276376 17276636 38312 39634 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 38570 38629 + cds 2xTY1 CLC
1548 2264 38636 39352 + cds SGFP CLC
2271 2312 39359 39400 + cds V5 CLC
2313 2336 39401 39424 + cds Precision cut site CLC
2337 2357 39425 39445 + cds TEV CLC
2358 2429 39446 39517 + cds BLRP CLC
3813 3846 39525 39558 + misc_recomb FRT CLC
dmel-5.43-2R
17276637 17276788 39635 39786 + three_prime_utr coding_transcript
17276901 17279944 39899 42942 + gene Acox57D-d coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Acox57D-p[38569]::S000169_fly_pretag_fwd
TGCCTAAGTACTTCCATGAGATCCTGAGGCCGTTCATGAAGTCAAACATCgaagtgcataccaatcaggacccgc
 fasta Fasta
Acox57D-p[38569]::S000169_fly_pretag_rev
TGAGCCTAACTCTAGATAGGTGGTTTAATAAACAGCTGTCCAAGGCACTActtgtcgtcgtcatccttgtagtca
 fasta Fasta