Clone: 1213189838248655 D11
Tagged gene: grsm
Identifier: FBgn0040493
Clone | FlyFos019782(pRedFlp-Hgr)(grsm[13934]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
8775764 | 8793434 | 13778 | 32510 | - | gene | grsm | coding_transcript | |
8775764 | 8793434 | 13778 | 32510 | - | mrna | FBtr0290273 | coding_transcript | |
8775764 | 8793100 | 13778 | 32176 | - | mrna | FBtr0290274 | coding_transcript | |
8775764 | 8787357 | 13778 | 26433 | - | mrna | FBtr0082730 | coding_transcript | |
8775764 | 8776049 | 13778 | 15125 | - | exon | coding_transcript | ||
8775764 | 8776049 | 13778 | 15125 | - | exon | coding_transcript | ||
8775764 | 8776049 | 13778 | 15125 | - | exon | coding_transcript | ||
8775764 | 8775917 | 13778 | 13931 | - | three_prime_utr | coding_transcript | ||
8775764 | 8775917 | 13778 | 13931 | - | three_prime_utr | coding_transcript | ||
8775764 | 8775917 | 13778 | 13931 | - | three_prime_utr | coding_transcript | ||
8775918 | 8776049 | 13932 | 15125 | - | cds | coding_transcript | ||
8775918 | 8776049 | 13932 | 15125 | - | cds | coding_transcript | ||
8775918 | 8776049 | 13932 | 15125 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 14008 | 14041 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 14049 | 14120 | - | cds | BLRP | CLC | |
2337 | 2357 | 14121 | 14141 | - | cds | TEV | CLC | |
2313 | 2336 | 14142 | 14165 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 14166 | 14207 | - | cds | V5 | CLC | |
1548 | 2264 | 14214 | 14930 | - | cds | SGFP | CLC | |
1482 | 1541 | 14937 | 14996 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3R | ||||||||
8776050 | 8776129 | 15126 | 15205 | - | intron | coding_transcript | ||
8776050 | 8776129 | 15126 | 15205 | - | intron | coding_transcript | ||
8776050 | 8776129 | 15126 | 15205 | - | intron | coding_transcript | ||
8776130 | 8776240 | 15206 | 15316 | - | exon | coding_transcript | ||
8776130 | 8776240 | 15206 | 15316 | - | cds | coding_transcript | ||
8776130 | 8776240 | 15206 | 15316 | - | exon | coding_transcript | ||
8776130 | 8776240 | 15206 | 15316 | - | cds | coding_transcript | ||
8776130 | 8776240 | 15206 | 15316 | - | exon | coding_transcript | ||
8776130 | 8776240 | 15206 | 15316 | - | cds | coding_transcript | ||
8776241 | 8782663 | 15317 | 21739 | - | intron | coding_transcript | ||
8776241 | 8782663 | 15317 | 21739 | - | intron | coding_transcript | ||
8776241 | 8782663 | 15317 | 21739 | - | intron | coding_transcript | ||
8782664 | 8782840 | 21740 | 21916 | - | exon | coding_transcript | ||
8782664 | 8782840 | 21740 | 21916 | - | cds | coding_transcript | ||
8782664 | 8782840 | 21740 | 21916 | - | exon | coding_transcript | ||
8782664 | 8782840 | 21740 | 21916 | - | cds | coding_transcript | ||
8782664 | 8782840 | 21740 | 21916 | - | exon | coding_transcript | ||
8782664 | 8782840 | 21740 | 21916 | - | cds | coding_transcript | ||
8782841 | 8784793 | 21917 | 23869 | - | intron | coding_transcript | ||
8782841 | 8784793 | 21917 | 23869 | - | intron | coding_transcript | ||
8782841 | 8784793 | 21917 | 23869 | - | intron | coding_transcript | ||
8784794 | 8784950 | 23870 | 24026 | - | exon | coding_transcript | ||
8784794 | 8784950 | 23870 | 24026 | - | cds | coding_transcript | ||
8784794 | 8784950 | 23870 | 24026 | - | exon | coding_transcript | ||
8784794 | 8784950 | 23870 | 24026 | - | cds | coding_transcript | ||
8784794 | 8784950 | 23870 | 24026 | - | exon | coding_transcript | ||
8784794 | 8784950 | 23870 | 24026 | - | cds | coding_transcript | ||
8784951 | 8785014 | 24027 | 24090 | - | intron | coding_transcript | ||
8784951 | 8785014 | 24027 | 24090 | - | intron | coding_transcript | ||
8784951 | 8785014 | 24027 | 24090 | - | intron | coding_transcript | ||
8785015 | 8786039 | 24091 | 25115 | - | exon | coding_transcript | ||
8785015 | 8786039 | 24091 | 25115 | - | cds | coding_transcript | ||
8785015 | 8786039 | 24091 | 25115 | - | exon | coding_transcript | ||
8785015 | 8786039 | 24091 | 25115 | - | cds | coding_transcript | ||
8785015 | 8786039 | 24091 | 25115 | - | exon | coding_transcript | ||
8785015 | 8786039 | 24091 | 25115 | - | cds | coding_transcript | ||
8786040 | 8792881 | 25116 | 31957 | - | intron | coding_transcript | ||
8786040 | 8792881 | 25116 | 31957 | - | intron | coding_transcript | ||
8786040 | 8787164 | 25116 | 26240 | - | intron | coding_transcript | ||
8787165 | 8787357 | 26241 | 26433 | - | exon | coding_transcript | ||
8787165 | 8787239 | 26241 | 26315 | - | cds | coding_transcript | ||
8787240 | 8787357 | 26316 | 26433 | - | five_prime_utr | coding_transcript | ||
8787474 | 8788975 | 26550 | 28051 | + | gene | Spc25 | coding_transcript | |
8787474 | 8788975 | 26550 | 28051 | + | mrna | FBtr0082690 | coding_transcript | |
8787474 | 8787684 | 26550 | 26760 | + | exon | coding_transcript | ||
8787474 | 8787557 | 26550 | 26633 | + | five_prime_utr | coding_transcript | ||
8787558 | 8787684 | 26634 | 26760 | + | cds | coding_transcript | ||
8787685 | 8787747 | 26761 | 26823 | + | intron | coding_transcript | ||
8787748 | 8787964 | 26824 | 27040 | + | exon | coding_transcript | ||
8787748 | 8787964 | 26824 | 27040 | + | cds | coding_transcript | ||
8787965 | 8788438 | 27041 | 27514 | + | intron | coding_transcript | ||
8788439 | 8788975 | 27515 | 28051 | + | exon | coding_transcript | ||
8788439 | 8788763 | 27515 | 27839 | + | cds | coding_transcript | ||
8788764 | 8788975 | 27840 | 28051 | + | three_prime_utr | coding_transcript | ||
8789519 | 8791652 | 28595 | 30728 | + | gene | Cyp304a1 | coding_transcript | |
8789519 | 8791652 | 28595 | 30728 | + | mrna | FBtr0082691 | coding_transcript | |
8789519 | 8789638 | 28595 | 28714 | + | exon | coding_transcript | ||
8789519 | 8789544 | 28595 | 28620 | + | five_prime_utr | coding_transcript | ||
8789545 | 8789638 | 28621 | 28714 | + | cds | coding_transcript | ||
8789639 | 8789699 | 28715 | 28775 | + | intron | coding_transcript | ||
8789700 | 8789951 | 28776 | 29027 | + | exon | coding_transcript | ||
8789700 | 8789951 | 28776 | 29027 | + | cds | coding_transcript | ||
8789952 | 8790241 | 29028 | 29317 | + | intron | coding_transcript | ||
8790242 | 8791098 | 29318 | 30174 | + | exon | coding_transcript | ||
8790242 | 8791098 | 29318 | 30174 | + | cds | coding_transcript | ||
8791099 | 8791164 | 30175 | 30240 | + | intron | coding_transcript | ||
8791165 | 8791652 | 30241 | 30728 | + | exon | coding_transcript | ||
8791165 | 8791494 | 30241 | 30570 | + | cds | coding_transcript | ||
8791495 | 8791652 | 30571 | 30728 | + | three_prime_utr | coding_transcript | ||
8791660 | 8792442 | 30736 | 31518 | - | gene | CG14384 | coding_transcript | |
8791660 | 8792442 | 30736 | 31518 | - | mrna | FBtr0082731 | coding_transcript | |
8791660 | 8792198 | 30736 | 31274 | - | exon | coding_transcript | ||
8791660 | 8791750 | 30736 | 30826 | - | three_prime_utr | coding_transcript | ||
8791751 | 8792198 | 30827 | 31274 | - | cds | coding_transcript | ||
8792199 | 8792274 | 31275 | 31350 | - | intron | coding_transcript | ||
8792275 | 8792442 | 31351 | 31518 | - | exon | coding_transcript | ||
8792275 | 8792324 | 31351 | 31400 | - | cds | coding_transcript | ||
8792325 | 8792442 | 31401 | 31518 | - | five_prime_utr | coding_transcript | ||
8792882 | 8793100 | 31958 | 32176 | - | exon | coding_transcript | ||
8792882 | 8793100 | 31958 | 32176 | - | five_prime_utr | coding_transcript | ||
8792882 | 8793100 | 31958 | 32176 | - | exon | coding_transcript | ||
8792882 | 8793100 | 31958 | 32176 | - | five_prime_utr | coding_transcript | ||
8793101 | 8793175 | 32177 | 32251 | - | intron | coding_transcript | ||
8793176 | 8793434 | 32252 | 32510 | - | exon | coding_transcript | ||
8793176 | 8793434 | 32252 | 32510 | - | five_prime_utr | coding_transcript | ||
8793497 | 8803193 | 32573 | 42269 | - | gene | CG7381 | coding_transcript | |
8803681 | 8806257 | 42757 | 45333 | + | gene | CG7091 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
grsm[13934]::S000169_fly_pretag_rev
AAATGTTAATCCAGTCAGGCACGTGGCACAGTAAAAGGCAGGCTGAGTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
grsm[13934]::S000169_fly_pretag_fwd
CCATCGCCTCCACAGACGAGGAGCCGCCCTCGAAGCGCTGGTGCCGCGATgaagtgcataccaatcaggacccgc
|
Fasta |