Clone: 1213189838248655 H08

Tagged gene: PGRP-SC2
Identifier: FBgn0043575

Clone FlyFos019750(pRedFlp-Hgr)(PGRP-SC2[22615]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
4594583 4596873 12175 14465 - gene CG14744 coding_transcript
4597268 4597825 14860 15417 + gene PGRP-SC1a coding_transcript
4597903 4600418 15495 18010 - gene CG14743 coding_transcript
4600949 4601587 18541 19179 + gene PGRP-SC1b coding_transcript
4604472 4605026 22064 23680 + gene PGRP-SC2 coding_transcript
4604472 4605026 22064 23680 + mrna FBtr0088709 coding_transcript
4604472 4605026 22064 23680 + exon coding_transcript
4604472 4605026 22064 23680 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 22616 22675 + cds 2xTY1 CLC
1548 2264 22682 23398 + cds SGFP CLC
2271 2312 23405 23446 + cds V5 CLC
2313 2336 23447 23470 + cds Precision cut site CLC
2337 2357 23471 23491 + cds TEV CLC
2358 2429 23492 23563 + cds BLRP CLC
3813 3846 23571 23604 + misc_recomb FRT CLC
dmel-5.43-2R
4605522 4611342 24176 29996 - gene CG14767 coding_transcript
4607605 4609129 26259 27783 - gene CG30357 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
PGRP-SC2[22615]::S000169_fly_pretag_rev
TTATTGGAACTGATTTTTATTTTTTTTACTGCATTTCCTTAGTGCTCTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
PGRP-SC2[22615]::S000169_fly_pretag_fwd
CCGGCACCAACATCTGGAACGAGATCCGCACCTGGTCCAACTGGAAGGCCgaagtgcataccaatcaggacccgc
fasta Fasta