Clone: 1213189838248655 C07
Tagged gene: CG42494
Identifier: FBgn0260026
Clone | FlyFos019724(pRedFlp-Hgr)(CG42494[28730]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
3204600 | 3205449 | 9751 | 10600 | + | gene | CG32277 | coding_transcript | |
3203675 | 3204448 | 10752 | 11525 | + | gene | CG33159 | coding_transcript | |
3202238 | 3203162 | 12038 | 12962 | + | gene | CG32271 | coding_transcript | |
3197862 | 3199043 | 16157 | 17338 | + | gene | CG32276 | coding_transcript | |
3197045 | 3197614 | 17586 | 18155 | + | gene | CG14966 | coding_transcript | |
3193027 | 3197059 | 18141 | 22173 | - | gene | Hsp83 | coding_transcript | |
3190622 | 3192468 | 22732 | 24578 | + | gene | CG14965 | coding_transcript | |
3189994 | 3190623 | 24577 | 25206 | - | gene | CG14958 | coding_transcript | |
3188025 | 3189747 | 25453 | 27175 | + | gene | CG42525 | coding_transcript | |
3187563 | 3188106 | 27094 | 27637 | - | gene | CG14957 | coding_transcript | |
3186664 | 3187245 | 27955 | 28536 | - | gene | CG32284 | coding_transcript | |
3184404 | 3186549 | 28651 | 31858 | - | gene | CG42494 | coding_transcript | |
3184404 | 3186549 | 28651 | 31858 | - | mrna | FBtr0300584 | coding_transcript | |
3185388 | 3186549 | 28651 | 30874 | - | mrna | FBtr0300583 | coding_transcript | |
3186349 | 3186549 | 28651 | 29913 | - | exon | coding_transcript | ||
3186349 | 3186549 | 28651 | 29913 | - | exon | coding_transcript | ||
3186473 | 3186549 | 28651 | 28727 | - | three_prime_utr | coding_transcript | ||
3186473 | 3186549 | 28651 | 28727 | - | three_prime_utr | coding_transcript | ||
3186349 | 3186472 | 28728 | 29913 | - | cds | coding_transcript | ||
3186349 | 3186472 | 28728 | 29913 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 28804 | 28837 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 28845 | 28916 | - | cds | BLRP | CLC | |
2337 | 2357 | 28917 | 28937 | - | cds | TEV | CLC | |
2313 | 2336 | 28938 | 28961 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 28962 | 29003 | - | cds | V5 | CLC | |
1548 | 2264 | 29010 | 29726 | - | cds | SGFP | CLC | |
1482 | 1541 | 29733 | 29792 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3L | ||||||||
3186297 | 3186348 | 29914 | 29965 | - | intron | coding_transcript | ||
3186297 | 3186348 | 29914 | 29965 | - | intron | coding_transcript | ||
3186012 | 3186296 | 29966 | 30250 | - | exon | coding_transcript | ||
3186012 | 3186296 | 29966 | 30250 | - | cds | coding_transcript | ||
3186012 | 3186296 | 29966 | 30250 | - | exon | coding_transcript | ||
3186012 | 3186296 | 29966 | 30250 | - | cds | coding_transcript | ||
3185953 | 3186011 | 30251 | 30309 | - | intron | coding_transcript | ||
3185953 | 3186011 | 30251 | 30309 | - | intron | coding_transcript | ||
3185634 | 3185952 | 30310 | 30628 | - | exon | coding_transcript | ||
3185634 | 3185952 | 30310 | 30628 | - | cds | coding_transcript | ||
3185634 | 3185952 | 30310 | 30628 | - | exon | coding_transcript | ||
3185634 | 3185952 | 30310 | 30628 | - | cds | coding_transcript | ||
3185578 | 3185633 | 30629 | 30684 | - | intron | coding_transcript | ||
3185578 | 3185633 | 30629 | 30684 | - | intron | coding_transcript | ||
3185481 | 3185577 | 30685 | 30781 | - | exon | coding_transcript | ||
3185481 | 3185577 | 30685 | 30781 | - | cds | coding_transcript | ||
3185481 | 3185577 | 30685 | 30781 | - | exon | coding_transcript | ||
3185481 | 3185577 | 30685 | 30781 | - | cds | coding_transcript | ||
3185423 | 3185480 | 30782 | 30839 | - | intron | coding_transcript | ||
3185423 | 3185480 | 30782 | 30839 | - | intron | coding_transcript | ||
3185229 | 3185422 | 30840 | 31033 | - | exon | coding_transcript | ||
3185388 | 3185422 | 30840 | 30874 | - | exon | coding_transcript | ||
3185396 | 3185422 | 30840 | 30866 | - | cds | coding_transcript | ||
3185396 | 3185422 | 30840 | 30866 | - | cds | coding_transcript | ||
3185229 | 3185395 | 30867 | 31033 | - | five_prime_utr | coding_transcript | ||
3185388 | 3185395 | 30867 | 30874 | - | five_prime_utr | coding_transcript | ||
3178934 | 3185287 | 30975 | 37328 | - | gene | Girdin | coding_transcript | |
3184667 | 3185287 | 30975 | 31595 | - | three_prime_utr | coding_transcript | ||
3184645 | 3185228 | 31034 | 31617 | - | intron | coding_transcript | ||
3184404 | 3184644 | 31618 | 31858 | - | exon | coding_transcript | ||
3184404 | 3184644 | 31618 | 31858 | - | five_prime_utr | coding_transcript | ||
3173263 | 3178477 | 37785 | 42999 | + | gene | CG14964 | coding_transcript | |
3171614 | 3172545 | 43717 | 44648 | + | gene | CG14963 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG42494[28730]::S000169_fly_pretag_rev
TTCAATAAATCTGATAATGATCGATTACTGCTGTTAAACGGTCTGACTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG42494[28730]::S000169_fly_pretag_fwd
TTGATGCTTCCTTGAAATCGTGCAGCGAAAACAAACCGGATTATTGCACCgaagtgcataccaatcaggacccgc
|
Fasta |