Clone: 1213189838248655 C07

Tagged gene: CG42494
Identifier: FBgn0260026

Clone FlyFos019724(pRedFlp-Hgr)(CG42494[28730]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3L
3204600 3205449 9751 10600 + gene CG32277 coding_transcript
3203675 3204448 10752 11525 + gene CG33159 coding_transcript
3202238 3203162 12038 12962 + gene CG32271 coding_transcript
3197862 3199043 16157 17338 + gene CG32276 coding_transcript
3197045 3197614 17586 18155 + gene CG14966 coding_transcript
3193027 3197059 18141 22173 - gene Hsp83 coding_transcript
3190622 3192468 22732 24578 + gene CG14965 coding_transcript
3189994 3190623 24577 25206 - gene CG14958 coding_transcript
3188025 3189747 25453 27175 + gene CG42525 coding_transcript
3187563 3188106 27094 27637 - gene CG14957 coding_transcript
3186664 3187245 27955 28536 - gene CG32284 coding_transcript
3184404 3186549 28651 31858 - gene CG42494 coding_transcript
3184404 3186549 28651 31858 - mrna FBtr0300584 coding_transcript
3185388 3186549 28651 30874 - mrna FBtr0300583 coding_transcript
3186349 3186549 28651 29913 - exon coding_transcript
3186349 3186549 28651 29913 - exon coding_transcript
3186473 3186549 28651 28727 - three_prime_utr coding_transcript
3186473 3186549 28651 28727 - three_prime_utr coding_transcript
3186349 3186472 28728 29913 - cds coding_transcript
3186349 3186472 28728 29913 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 28804 28837 - misc_recomb FRT CLC
2358 2429 28845 28916 - cds BLRP CLC
2337 2357 28917 28937 - cds TEV CLC
2313 2336 28938 28961 - cds Precision cut site CLC
2271 2312 28962 29003 - cds V5 CLC
1548 2264 29010 29726 - cds SGFP CLC
1482 1541 29733 29792 - cds 2xTY1 CLC
dmel-5.43-3L
3186297 3186348 29914 29965 - intron coding_transcript
3186297 3186348 29914 29965 - intron coding_transcript
3186012 3186296 29966 30250 - exon coding_transcript
3186012 3186296 29966 30250 - cds coding_transcript
3186012 3186296 29966 30250 - exon coding_transcript
3186012 3186296 29966 30250 - cds coding_transcript
3185953 3186011 30251 30309 - intron coding_transcript
3185953 3186011 30251 30309 - intron coding_transcript
3185634 3185952 30310 30628 - exon coding_transcript
3185634 3185952 30310 30628 - cds coding_transcript
3185634 3185952 30310 30628 - exon coding_transcript
3185634 3185952 30310 30628 - cds coding_transcript
3185578 3185633 30629 30684 - intron coding_transcript
3185578 3185633 30629 30684 - intron coding_transcript
3185481 3185577 30685 30781 - exon coding_transcript
3185481 3185577 30685 30781 - cds coding_transcript
3185481 3185577 30685 30781 - exon coding_transcript
3185481 3185577 30685 30781 - cds coding_transcript
3185423 3185480 30782 30839 - intron coding_transcript
3185423 3185480 30782 30839 - intron coding_transcript
3185229 3185422 30840 31033 - exon coding_transcript
3185388 3185422 30840 30874 - exon coding_transcript
3185396 3185422 30840 30866 - cds coding_transcript
3185396 3185422 30840 30866 - cds coding_transcript
3185229 3185395 30867 31033 - five_prime_utr coding_transcript
3185388 3185395 30867 30874 - five_prime_utr coding_transcript
3178934 3185287 30975 37328 - gene Girdin coding_transcript
3184667 3185287 30975 31595 - three_prime_utr coding_transcript
3184645 3185228 31034 31617 - intron coding_transcript
3184404 3184644 31618 31858 - exon coding_transcript
3184404 3184644 31618 31858 - five_prime_utr coding_transcript
3173263 3178477 37785 42999 + gene CG14964 coding_transcript
3171614 3172545 43717 44648 + gene CG14963 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG42494[28730]::S000169_fly_pretag_rev
TTCAATAAATCTGATAATGATCGATTACTGCTGTTAAACGGTCTGACTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG42494[28730]::S000169_fly_pretag_fwd
TTGATGCTTCCTTGAAATCGTGCAGCGAAAACAAACCGGATTATTGCACCgaagtgcataccaatcaggacccgc
fasta Fasta