Clone: 1213189838248655 C05

Tagged gene: CG11839
Identifier: FBgn0039271

Clone FlyFos019695(pRedFlp-Hgr)(CG11839[20937]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
20890140 20891317 14477 15654 - gene veli coding_transcript
20891527 20892440 15864 16777 + gene PQBP1 coding_transcript
20892434 20895372 16771 19709 - gene OstStt3 coding_transcript
20895649 20896636 19986 22035 + gene CG11839 coding_transcript
20895649 20896636 19986 22035 + mrna FBtr0304718 coding_transcript
20895649 20895772 19986 20109 + exon coding_transcript
20895649 20895686 19986 20023 + five_prime_utr coding_transcript
20895687 20895772 20024 20109 + cds coding_transcript
20895773 20895924 20110 20261 + intron coding_transcript
20895925 20896636 20262 22035 + exon coding_transcript
20895925 20896603 20262 22002 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 20938 20997 + cds 2xTY1 CLC
1548 2264 21004 21720 + cds SGFP CLC
2271 2312 21727 21768 + cds V5 CLC
2313 2336 21769 21792 + cds Precision cut site CLC
2337 2357 21793 21813 + cds TEV CLC
2358 2429 21814 21885 + cds BLRP CLC
3813 3846 21893 21926 + misc_recomb FRT CLC
dmel-5.43-3R
20896604 20896636 22003 22035 + three_prime_utr coding_transcript
20896853 20898434 22252 23833 + gene CG11836 coding_transcript
20898451 20900329 23850 25728 - gene CG9996 coding_transcript
20900604 20902104 26003 27503 + gene CG11920 coding_transcript
20909274 20910392 34673 35791 + gene fd96Ca coding_transcript
20920831 20921655 46230 47054 + gene fd96Cb coding_transcript
20923364 20925507 48763 50906 + gene CG33096 coding_transcript
20924610 20927868 50009 53267 + gene CG33095 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG11839[20937]::S000169_fly_pretag_fwd
ATTGCAGTGTGGATGATTTGTTCGACTGGAGAACGAAAAATCTGCATAGCgaagtgcataccaatcaggacccgc
 fasta Fasta
CG11839[20937]::S000169_fly_pretag_rev
ACGTTTGTTGTTTTATAACAGTAACATTTTAATACCATATTTATTCTCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta