Clone: 1213189838248655 H04

Tagged gene: CG9996
Identifier: FBgn0039273

Clone FlyFos019695(pRedFlp-Hgr)(CG9996[22951]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
20890140 20891317 14477 15654 - gene veli coding_transcript
20891527 20892440 15864 16777 + gene PQBP1 coding_transcript
20892434 20895372 16771 19709 - gene OstStt3 coding_transcript
20895649 20896636 19986 20973 + gene CG11839 coding_transcript
20896853 20898434 21190 22771 + gene CG11836 coding_transcript
20898451 20900329 22788 25728 - gene CG9996 coding_transcript
20898451 20900329 22788 25728 - mrna FBtr0113285 coding_transcript
20898451 20899280 22788 24679 - exon coding_transcript
20898451 20898611 22788 22948 - three_prime_utr coding_transcript
20898612 20899280 22949 24679 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 23025 23058 - misc_recomb FRT CLC
2358 2429 23066 23137 - cds BLRP CLC
2337 2357 23138 23158 - cds TEV CLC
2313 2336 23159 23182 - cds Precision cut site CLC
2271 2312 23183 23224 - cds V5 CLC
1548 2264 23231 23947 - cds SGFP CLC
1482 1541 23954 24013 - cds 2xTY1 CLC
dmel-5.43-3R
20899281 20899336 24680 24735 - intron coding_transcript
20899337 20899634 24736 25033 - exon coding_transcript
20899337 20899634 24736 25033 - cds coding_transcript
20899635 20899888 25034 25287 - intron coding_transcript
20899889 20900007 25288 25406 - exon coding_transcript
20899889 20900007 25288 25406 - cds coding_transcript
20900008 20900080 25407 25479 - intron coding_transcript
20900081 20900329 25480 25728 - exon coding_transcript
20900081 20900083 25480 25482 - cds coding_transcript
20900084 20900329 25483 25728 - five_prime_utr coding_transcript
20900604 20902104 26003 27503 + gene CG11920 coding_transcript
20909274 20910392 34673 35791 + gene fd96Ca coding_transcript
20920831 20921655 46230 47054 + gene fd96Cb coding_transcript
20923364 20925507 48763 50906 + gene CG33096 coding_transcript
20924610 20927868 50009 53267 + gene CG33095 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG9996[22951]::S000169_fly_pretag_rev
CACTTTCTAATAATAACCTAGTGCATTATTTTACAATTACTGTACTGCTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG9996[22951]::S000169_fly_pretag_fwd
AAGTCTTAAAAGTGGCGAACGCAGTCGTAACTAAAAGGTACAGGGAAGTCgaagtgcataccaatcaggacccgc
fasta Fasta