Clone: 1213189838248655 D03
Tagged gene: CG13794
Identifier: FBgn0031936
| Clone | FlyFos019673(pRedFlp-Hgr)(CG13794[15922]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2L | ||||||||
| 7714069 | 7716645 | 10081 | 12657 | - | gene | CG33296 | coding_transcript | |
| 7716972 | 7719487 | 12984 | 15499 | - | gene | CG13793 | coding_transcript | |
| 7719847 | 7722823 | 15859 | 19897 | - | gene | CG13794 | coding_transcript | |
| 7719847 | 7722823 | 15859 | 19897 | - | mrna | FBtr0079507 | coding_transcript | |
| 7719847 | 7720180 | 15859 | 17254 | - | exon | coding_transcript | ||
| 7719847 | 7719907 | 15859 | 15919 | - | three_prime_utr | coding_transcript | ||
| 7719908 | 7720180 | 15920 | 17254 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 15996 | 16029 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 16037 | 16108 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 16109 | 16129 | - | cds | TEV | CLC | |
| 2313 | 2336 | 16130 | 16153 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 16154 | 16195 | - | cds | V5 | CLC | |
| 1548 | 2264 | 16202 | 16918 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 16925 | 16984 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-2L | ||||||||
| 7720181 | 7720238 | 17255 | 17312 | - | intron | coding_transcript | ||
| 7720239 | 7720445 | 17313 | 17519 | - | exon | coding_transcript | ||
| 7720239 | 7720445 | 17313 | 17519 | - | cds | coding_transcript | ||
| 7720446 | 7720539 | 17520 | 17613 | - | intron | coding_transcript | ||
| 7720540 | 7720668 | 17614 | 17742 | - | exon | coding_transcript | ||
| 7720540 | 7720668 | 17614 | 17742 | - | cds | coding_transcript | ||
| 7720669 | 7720825 | 17743 | 17899 | - | intron | coding_transcript | ||
| 7720826 | 7720974 | 17900 | 18048 | - | exon | coding_transcript | ||
| 7720826 | 7720974 | 17900 | 18048 | - | cds | coding_transcript | ||
| 7720975 | 7721115 | 18049 | 18189 | - | intron | coding_transcript | ||
| 7721116 | 7721585 | 18190 | 18659 | - | exon | coding_transcript | ||
| 7721116 | 7721585 | 18190 | 18659 | - | cds | coding_transcript | ||
| 7721586 | 7721772 | 18660 | 18846 | - | intron | coding_transcript | ||
| 7721773 | 7721873 | 18847 | 18947 | - | exon | coding_transcript | ||
| 7721773 | 7721873 | 18847 | 18947 | - | cds | coding_transcript | ||
| 7721874 | 7721929 | 18948 | 19003 | - | intron | coding_transcript | ||
| 7721930 | 7722093 | 19004 | 19167 | - | exon | coding_transcript | ||
| 7721930 | 7722093 | 19004 | 19167 | - | cds | coding_transcript | ||
| 7722094 | 7722148 | 19168 | 19222 | - | intron | coding_transcript | ||
| 7722149 | 7722280 | 19223 | 19354 | - | exon | coding_transcript | ||
| 7722149 | 7722280 | 19223 | 19354 | - | cds | coding_transcript | ||
| 7722281 | 7722482 | 19355 | 19556 | - | intron | coding_transcript | ||
| 7722483 | 7722823 | 19557 | 19897 | - | exon | coding_transcript | ||
| 7722483 | 7722645 | 19557 | 19719 | - | cds | coding_transcript | ||
| 7722646 | 7722823 | 19720 | 19897 | - | five_prime_utr | coding_transcript | ||
| 7723310 | 7726298 | 20384 | 23372 | - | gene | CG13795 | coding_transcript | |
| 7727150 | 7732668 | 24224 | 29742 | - | gene | CG13796 | coding_transcript | |
| 7734411 | 7738795 | 31485 | 35869 | - | gene | CG31904 | coding_transcript | |
| 7740552 | 7741542 | 37626 | 38616 | - | gene | Acp1 | coding_transcript | |
| 7743677 | 7744841 | 40751 | 41915 | - | gene | CG7214 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG13794[15922]::S000169_fly_pretag_fwd
AAGCTGTTAGCAATACGGATATGACCCAACAGCTTACTGCCGGACCAAACgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG13794[15922]::S000169_fly_pretag_rev
CAATTGTTTATTTGGCAAAATAAAGAAGTTACTCTTGATGGAAAAACTCActtgtcgtcgtcatccttgtagtca
|
Fasta
|