Clone: 1213189838248655 B02
Tagged gene: CG6652
Identifier: FBgn0036687
Clone | FlyFos019653(pRedFlp-Hgr)(CG6652[33809]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3L | ||||||||
17035902 | 17037565 | 9901 | 11564 | - | gene | Papst2 | coding_transcript | |
17029959 | 17035671 | 11795 | 17507 | + | gene | scaf6 | coding_transcript | |
17028774 | 17029965 | 17501 | 18692 | - | gene | beg | coding_transcript | |
17026219 | 17026776 | 20690 | 21247 | + | gene | CG43250 | coding_transcript | |
17022912 | 17025180 | 22286 | 24554 | + | gene | CG14059 | coding_transcript | |
17020621 | 17022918 | 24548 | 26845 | - | gene | CG7730 | coding_transcript | |
17017430 | 17020219 | 27247 | 30036 | - | gene | Fit2 | coding_transcript | |
17016222 | 17016841 | 30625 | 31244 | + | gene | a10 | coding_transcript | |
17013440 | 17015956 | 31510 | 35088 | + | gene | CG6652 | coding_transcript | |
17013440 | 17015956 | 31510 | 35088 | + | mrna | FBtr0075291 | coding_transcript | |
17013443 | 17015956 | 31510 | 35085 | + | mrna | FBtr0075292 | coding_transcript | |
17015660 | 17015956 | 31510 | 31806 | + | exon | coding_transcript | ||
17015660 | 17015956 | 31510 | 31806 | + | exon | coding_transcript | ||
17015734 | 17015956 | 31510 | 31732 | + | five_prime_utr | coding_transcript | ||
17015734 | 17015956 | 31510 | 31732 | + | five_prime_utr | coding_transcript | ||
17015660 | 17015733 | 31733 | 31806 | + | cds | coding_transcript | ||
17015660 | 17015733 | 31733 | 31806 | + | cds | coding_transcript | ||
17015587 | 17015659 | 31807 | 31879 | + | intron | coding_transcript | ||
17015587 | 17015659 | 31807 | 31879 | + | intron | coding_transcript | ||
17015098 | 17015586 | 31880 | 32368 | + | exon | coding_transcript | ||
17015098 | 17015586 | 31880 | 32368 | + | cds | coding_transcript | ||
17015098 | 17015586 | 31880 | 32368 | + | exon | coding_transcript | ||
17015098 | 17015586 | 31880 | 32368 | + | cds | coding_transcript | ||
17015026 | 17015097 | 32369 | 32440 | + | intron | coding_transcript | ||
17015026 | 17015097 | 32369 | 32440 | + | intron | coding_transcript | ||
17014800 | 17015025 | 32441 | 32666 | + | exon | coding_transcript | ||
17014800 | 17015025 | 32441 | 32666 | + | cds | coding_transcript | ||
17014800 | 17015025 | 32441 | 32666 | + | exon | coding_transcript | ||
17014800 | 17015025 | 32441 | 32666 | + | cds | coding_transcript | ||
17014642 | 17014799 | 32667 | 32824 | + | intron | coding_transcript | ||
17014747 | 17014799 | 32667 | 32719 | + | intron | coding_transcript | ||
17013985 | 17014746 | 32720 | 33481 | + | exon | coding_transcript | ||
17013985 | 17014746 | 32720 | 33481 | + | cds | coding_transcript | ||
17013985 | 17014641 | 32825 | 33481 | + | exon | coding_transcript | ||
17013985 | 17014641 | 32825 | 33481 | + | cds | coding_transcript | ||
17013918 | 17013984 | 33482 | 33548 | + | intron | coding_transcript | ||
17013918 | 17013984 | 33482 | 33548 | + | intron | coding_transcript | ||
17013440 | 17013917 | 33549 | 35088 | + | exon | coding_transcript | ||
17013443 | 17013917 | 33549 | 35085 | + | exon | coding_transcript | ||
17013654 | 17013917 | 33549 | 34874 | + | cds | coding_transcript | ||
17013654 | 17013917 | 33549 | 34874 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 33810 | 33869 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 33876 | 34592 | + | cds | SGFP | CLC | |
2271 | 2312 | 34599 | 34640 | + | cds | V5 | CLC | |
2313 | 2336 | 34641 | 34664 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 34665 | 34685 | + | cds | TEV | CLC | |
2358 | 2429 | 34686 | 34757 | + | cds | BLRP | CLC | |
3813 | 3846 | 34765 | 34798 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3L | ||||||||
17013440 | 17013653 | 34875 | 35088 | + | three_prime_utr | coding_transcript | ||
17013443 | 17013653 | 34875 | 35085 | + | three_prime_utr | coding_transcript | ||
17009654 | 17013370 | 35158 | 38874 | - | gene | CG7728 | coding_transcript | |
17005986 | 17009280 | 39248 | 42542 | + | gene | CG6664 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG6652[33809]::S000169_fly_pretag_fwd
ATGCCCTTTTGGCCGCTCTAAAGACGATCGACGACAACAAGAGCCAGGACgaagtgcataccaatcaggacccgc
|
Fasta |
CG6652[33809]::S000169_fly_pretag_rev
AAGGACTAACTTGAACTGGACATGGGTGGAAACTATTGCAGTGCACTCTActtgtcgtcgtcatccttgtagtca
|
Fasta |