Clone: 3294706831667914 A11
Tagged gene: CG7668
Identifier: FBgn0036929
| Clone | FlyFos019137(pRedFlp-Hgr)(CG7668[20144]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3L | ||||||||
| 19995858 | 19997706 | 20085 | 22995 | - | gene | CG7668 | coding_transcript | |
| 19995858 | 19997706 | 20085 | 22995 | - | mrna | FBtr0074904 | coding_transcript | |
| 19995858 | 19997706 | 20085 | 22995 | - | mrna | FBtr0074905 | coding_transcript | |
| 19997517 | 19997706 | 20085 | 21336 | - | exon | coding_transcript | ||
| 19997517 | 19997706 | 20085 | 21336 | - | exon | coding_transcript | ||
| 19997650 | 19997706 | 20085 | 20141 | - | three_prime_utr | coding_transcript | ||
| 19997650 | 19997706 | 20085 | 20141 | - | three_prime_utr | coding_transcript | ||
| 19997517 | 19997649 | 20142 | 21336 | - | cds | coding_transcript | ||
| 19997517 | 19997649 | 20142 | 21336 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 20218 | 20251 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 20259 | 20330 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 20331 | 20351 | - | cds | TEV | CLC | |
| 2313 | 2336 | 20352 | 20375 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 20376 | 20417 | - | cds | V5 | CLC | |
| 1548 | 2264 | 20424 | 21140 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 21147 | 21206 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3L | ||||||||
| 19997464 | 19997516 | 21337 | 21389 | - | intron | coding_transcript | ||
| 19997464 | 19997516 | 21337 | 21389 | - | intron | coding_transcript | ||
| 19996403 | 19997463 | 21390 | 22450 | - | exon | coding_transcript | ||
| 19996403 | 19997463 | 21390 | 22450 | - | cds | coding_transcript | ||
| 19996699 | 19997463 | 21390 | 22154 | - | exon | coding_transcript | ||
| 19996699 | 19997463 | 21390 | 22154 | - | cds | coding_transcript | ||
| 19996651 | 19996698 | 22155 | 22202 | - | intron | coding_transcript | ||
| 19996403 | 19996650 | 22203 | 22450 | - | exon | coding_transcript | ||
| 19996403 | 19996650 | 22203 | 22450 | - | cds | coding_transcript | ||
| 19996093 | 19996402 | 22451 | 22760 | - | intron | coding_transcript | ||
| 19996093 | 19996402 | 22451 | 22760 | - | intron | coding_transcript | ||
| 19995858 | 19996092 | 22761 | 22995 | - | exon | coding_transcript | ||
| 19995858 | 19996092 | 22761 | 22995 | - | exon | coding_transcript | ||
| 19996018 | 19996092 | 22761 | 22835 | - | cds | coding_transcript | ||
| 19996018 | 19996092 | 22761 | 22835 | - | cds | coding_transcript | ||
| 19995858 | 19996017 | 22836 | 22995 | - | five_prime_utr | coding_transcript | ||
| 19995858 | 19996017 | 22836 | 22995 | - | five_prime_utr | coding_transcript | ||
| 19994187 | 19995407 | 23446 | 24666 | - | gene | Tom20 | coding_transcript | |
| 19990814 | 19993786 | 25067 | 28039 | + | gene | CG7433 | coding_transcript | |
| 19985023 | 19990798 | 28055 | 33830 | - | gene | Nca | coding_transcript | |
| 19985016 | 19989012 | 29841 | 33837 | - | gene | CG7646 | coding_transcript | |
| 19982651 | 19984279 | 34574 | 36202 | + | gene | fln | coding_transcript | |
| 19981127 | 19982047 | 36806 | 37726 | + | gene | Csas | coding_transcript | |
| 19979177 | 19981172 | 37681 | 39676 | - | gene | schuy | coding_transcript | |
| 19977520 | 19978968 | 39885 | 41333 | + | gene | hale | coding_transcript | |
Sets
Oligos
| Name/Sequence | Export |
|---|---|
|
CG7668[20144]::S000169_fly_pretag_fwd
GTAATAGATATCCCCTGAAGTCGTGCAAAATGCTAATCAGACCAATGCCGgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG7668[20144]::S000169_fly_pretag_rev
ACTTTTATTTCCGTGACAATGTTATTTGACAAGCCATTATACTTGGCTCActtgtcgtcgtcatccttgtagtca
|
Fasta
|