Clone: 0864533050210965 D12

Tagged gene: CG5953
Identifier: FBgn0032587

Clone FlyFos018969(pRedFlp-Hgr)(CG5953[38658]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
16509120 16532877 15920 40739 + gene CG5953 coding_transcript
16509120 16532877 15920 40739 + mrna FBtr0080873 coding_transcript
16509120 16532877 15920 40739 + mrna FBtr0080874 coding_transcript
16532459 16532877 15920 16338 + exon coding_transcript
16532459 16532877 15920 16338 + five_prime_utr coding_transcript
16532721 16532877 15920 16076 + exon coding_transcript
16532721 16532877 15920 16076 + five_prime_utr coding_transcript
16528440 16532720 16077 20357 + intron coding_transcript
16528440 16532458 16339 20357 + intron coding_transcript
16527390 16528439 20358 21407 + exon coding_transcript
16527390 16528439 20358 21407 + exon coding_transcript
16528185 16528439 20358 20612 + five_prime_utr coding_transcript
16528185 16528439 20358 20612 + five_prime_utr coding_transcript
16527390 16528184 20613 21407 + cds coding_transcript
16527390 16528184 20613 21407 + cds coding_transcript
16511447 16527389 21408 37350 + intron coding_transcript
16511447 16527389 21408 37350 + intron coding_transcript
16509120 16520177 28620 40739 + mrna FBtr0301144 coding_transcript
16519970 16520177 28620 28827 + exon coding_transcript
16520081 16520177 28620 28716 + five_prime_utr coding_transcript
16519970 16520080 28717 28827 + cds coding_transcript
16511447 16519969 28828 37350 + intron coding_transcript
16509120 16511446 37351 40739 + exon coding_transcript
16509120 16511446 37351 40739 + exon coding_transcript
16509120 16511446 37351 40739 + exon coding_transcript
16510136 16511446 37351 39723 + cds coding_transcript
16510136 16511446 37351 39723 + cds coding_transcript
16510136 16511446 37351 39723 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 38659 38718 + cds 2xTY1 CLC
1548 2264 38725 39441 + cds SGFP CLC
2271 2312 39448 39489 + cds V5 CLC
2313 2336 39490 39513 + cds Precision cut site CLC
2337 2357 39514 39534 + cds TEV CLC
2358 2429 39535 39606 + cds BLRP CLC
3813 3846 39614 39647 + misc_recomb FRT CLC
dmel-5.43-2L
16509120 16510135 39724 40739 + three_prime_utr coding_transcript
16509120 16510135 39724 40739 + three_prime_utr coding_transcript
16509120 16510135 39724 40739 + three_prime_utr coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5953[38658]::S000169_fly_pretag_fwd
ACTATGGGCAATTCAACGAGCTGGAACGCTCGGCGCGGATACAGCCCAAGgaagtgcataccaatcaggacccgc
fasta Fasta
CG5953[38658]::S000169_fly_pretag_rev
CTACTTCCGTTACCCATCGCAGCCGTCCACTTCTTGGGGCGCCACTGTCActtgtcgtcgtcatccttgtagtca
fasta Fasta