Clone: 0864533050210965 B12
Tagged gene: Sb
Identifier: FBgn0003319
Clone | FlyFos018962(pRedFlp-Hgr)(Sb[37473]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
11954451 | 11971006 | 21443 | 39060 | + | gene | Sb | coding_transcript | |
11954451 | 11971006 | 21443 | 39060 | + | mrna | FBtr0083250 | coding_transcript | |
11954451 | 11954602 | 21443 | 21594 | + | exon | coding_transcript | ||
11954451 | 11954602 | 21443 | 21594 | + | five_prime_utr | coding_transcript | ||
11954603 | 11957948 | 21595 | 24940 | + | intron | coding_transcript | ||
11957949 | 11958666 | 24941 | 25658 | + | exon | coding_transcript | ||
11957949 | 11958666 | 24941 | 25658 | + | five_prime_utr | coding_transcript | ||
11958667 | 11965546 | 25659 | 32538 | + | intron | coding_transcript | ||
11965547 | 11965609 | 32539 | 32601 | + | exon | coding_transcript | ||
11965547 | 11965568 | 32539 | 32560 | + | five_prime_utr | coding_transcript | ||
11965569 | 11965609 | 32561 | 32601 | + | cds | coding_transcript | ||
11965610 | 11966304 | 32602 | 33296 | + | intron | coding_transcript | ||
11966305 | 11966904 | 33297 | 33896 | + | exon | coding_transcript | ||
11966305 | 11966904 | 33297 | 33896 | + | cds | coding_transcript | ||
11966905 | 11967100 | 33897 | 34092 | + | intron | coding_transcript | ||
11967101 | 11967294 | 34093 | 34286 | + | exon | coding_transcript | ||
11967101 | 11967294 | 34093 | 34286 | + | cds | coding_transcript | ||
11967295 | 11967386 | 34287 | 34378 | + | intron | coding_transcript | ||
11967387 | 11967712 | 34379 | 34704 | + | exon | coding_transcript | ||
11967387 | 11967712 | 34379 | 34704 | + | cds | coding_transcript | ||
11967713 | 11968407 | 34705 | 35399 | + | intron | coding_transcript | ||
11968408 | 11968837 | 35400 | 35829 | + | exon | coding_transcript | ||
11968408 | 11968837 | 35400 | 35829 | + | cds | coding_transcript | ||
11968838 | 11969351 | 35830 | 36343 | + | intron | coding_transcript | ||
11969352 | 11969541 | 36344 | 36533 | + | exon | coding_transcript | ||
11969352 | 11969541 | 36344 | 36533 | + | cds | coding_transcript | ||
11969542 | 11969616 | 36534 | 36608 | + | intron | coding_transcript | ||
11969617 | 11969914 | 36609 | 36906 | + | exon | coding_transcript | ||
11969617 | 11969914 | 36609 | 36906 | + | cds | coding_transcript | ||
11969915 | 11970144 | 36907 | 37136 | + | intron | coding_transcript | ||
11970145 | 11970294 | 37137 | 37286 | + | exon | coding_transcript | ||
11970145 | 11970294 | 37137 | 37286 | + | cds | coding_transcript | ||
11970295 | 11970349 | 37287 | 37341 | + | intron | coding_transcript | ||
11970350 | 11971006 | 37342 | 39060 | + | exon | coding_transcript | ||
11970350 | 11970484 | 37342 | 38538 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 37474 | 37533 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 37540 | 38256 | + | cds | SGFP | CLC | |
2271 | 2312 | 38263 | 38304 | + | cds | V5 | CLC | |
2313 | 2336 | 38305 | 38328 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 38329 | 38349 | + | cds | TEV | CLC | |
2358 | 2429 | 38350 | 38421 | + | cds | BLRP | CLC | |
3813 | 3846 | 38429 | 38462 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3R | ||||||||
11970485 | 11971006 | 38539 | 39060 | + | three_prime_utr | coding_transcript | ||
11971397 | 11972577 | 39451 | 40631 | - | gene | CG5903 | coding_transcript | |
11972741 | 11975115 | 40795 | 43169 | + | gene | CG5916 | coding_transcript | |
11975291 | 11977064 | 43345 | 45118 | - | gene | Fer2 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
Sb[37473]::S000169_fly_pretag_rev
AAACAAATAACAAAAGTAGATCTGCCGTCGTCAGTATCTTCTGATCATCActtgtcgtcgtcatccttgtagtca
|
Fasta |
Sb[37473]::S000169_fly_pretag_fwd
TCTGTACGAGAATCTCCAAGTTTACGCCGTGGATACTGGAGCATGTCAGAgaagtgcataccaatcaggacccgc
|
Fasta |