Clone: 0864533050210965 E09
Tagged gene: trp
Identifier: FBgn0003861
Clone | FlyFos018937(pRedFlp-Hgr)(trp[25868]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
25754423 | 25756108 | 10081 | 11766 | + | gene | CG31202 | coding_transcript | |
25752974 | 25754488 | 11701 | 13215 | - | gene | CG15522 | coding_transcript | |
25750948 | 25751907 | 14282 | 15241 | + | gene | Jon99Ci | coding_transcript | |
25749476 | 25750333 | 15856 | 16713 | + | gene | Jon99Cii | coding_transcript | |
25747931 | 25748823 | 17366 | 18258 | - | gene | Jon99Ciii | coding_transcript | |
25740242 | 25746011 | 20178 | 27009 | + | gene | trp | coding_transcript | |
25740242 | 25746011 | 20178 | 27009 | + | mrna | FBtr0085513 | coding_transcript | |
25745637 | 25746011 | 20178 | 20552 | + | exon | coding_transcript | ||
25745786 | 25746011 | 20178 | 20403 | + | five_prime_utr | coding_transcript | ||
25745637 | 25745785 | 20404 | 20552 | + | cds | coding_transcript | ||
25745579 | 25745636 | 20553 | 20610 | + | intron | coding_transcript | ||
25745341 | 25745578 | 20611 | 20848 | + | exon | coding_transcript | ||
25745341 | 25745578 | 20611 | 20848 | + | cds | coding_transcript | ||
25745280 | 25745340 | 20849 | 20909 | + | intron | coding_transcript | ||
25745137 | 25745279 | 20910 | 21052 | + | exon | coding_transcript | ||
25745137 | 25745279 | 20910 | 21052 | + | cds | coding_transcript | ||
25744750 | 25745136 | 21053 | 21439 | + | intron | coding_transcript | ||
25744548 | 25744749 | 21440 | 21641 | + | exon | coding_transcript | ||
25744548 | 25744749 | 21440 | 21641 | + | cds | coding_transcript | ||
25744454 | 25744547 | 21642 | 21735 | + | intron | coding_transcript | ||
25744277 | 25744453 | 21736 | 21912 | + | exon | coding_transcript | ||
25744277 | 25744453 | 21736 | 21912 | + | cds | coding_transcript | ||
25744110 | 25744276 | 21913 | 22079 | + | intron | coding_transcript | ||
25743875 | 25744109 | 22080 | 22314 | + | exon | coding_transcript | ||
25743875 | 25744109 | 22080 | 22314 | + | cds | coding_transcript | ||
25743820 | 25743874 | 22315 | 22369 | + | intron | coding_transcript | ||
25743521 | 25743819 | 22370 | 22668 | + | exon | coding_transcript | ||
25743521 | 25743819 | 22370 | 22668 | + | cds | coding_transcript | ||
25743464 | 25743520 | 22669 | 22725 | + | intron | coding_transcript | ||
25743096 | 25743463 | 22726 | 23093 | + | exon | coding_transcript | ||
25743096 | 25743463 | 22726 | 23093 | + | cds | coding_transcript | ||
25743035 | 25743095 | 23094 | 23154 | + | intron | coding_transcript | ||
25742677 | 25743034 | 23155 | 23512 | + | exon | coding_transcript | ||
25742677 | 25743034 | 23155 | 23512 | + | cds | coding_transcript | ||
25742362 | 25742676 | 23513 | 23827 | + | intron | coding_transcript | ||
25742142 | 25742361 | 23828 | 24047 | + | exon | coding_transcript | ||
25742142 | 25742361 | 23828 | 24047 | + | cds | coding_transcript | ||
25741931 | 25742141 | 24048 | 24258 | + | intron | coding_transcript | ||
25741765 | 25741930 | 24259 | 24424 | + | exon | coding_transcript | ||
25741765 | 25741930 | 24259 | 24424 | + | cds | coding_transcript | ||
25741710 | 25741764 | 24425 | 24479 | + | intron | coding_transcript | ||
25741549 | 25741709 | 24480 | 24640 | + | exon | coding_transcript | ||
25741549 | 25741709 | 24480 | 24640 | + | cds | coding_transcript | ||
25741490 | 25741548 | 24641 | 24699 | + | intron | coding_transcript | ||
25741335 | 25741489 | 24700 | 24854 | + | exon | coding_transcript | ||
25741335 | 25741489 | 24700 | 24854 | + | cds | coding_transcript | ||
25741275 | 25741334 | 24855 | 24914 | + | intron | coding_transcript | ||
25740242 | 25741274 | 24915 | 27009 | + | exon | coding_transcript | ||
25740318 | 25741274 | 24915 | 26933 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 25869 | 25928 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 25935 | 26651 | + | cds | SGFP | CLC | |
2271 | 2312 | 26658 | 26699 | + | cds | V5 | CLC | |
2313 | 2336 | 26700 | 26723 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 26724 | 26744 | + | cds | TEV | CLC | |
2358 | 2429 | 26745 | 26816 | + | cds | BLRP | CLC | |
3813 | 3846 | 26824 | 26857 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3R | ||||||||
25740242 | 25740317 | 26934 | 27009 | + | three_prime_utr | coding_transcript | ||
25738707 | 25740050 | 27201 | 28544 | + | gene | capa | coding_transcript | |
25733831 | 25738614 | 28637 | 33420 | - | gene | CG31036 | coding_transcript | |
25731188 | 25732171 | 35080 | 36063 | - | gene | CG15515 | coding_transcript | |
25728986 | 25729523 | 37728 | 38265 | + | gene | CG15517 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
trp[25868]::S000169_fly_pretag_fwd
GAGAACGAGGCAAATCCACGGTCACAGGACGCATGATCTCCGGCTGGCTCgaagtgcataccaatcaggacccgc
|
Fasta |
trp[25868]::S000169_fly_pretag_rev
AACAAAGGACTTAACTATTTAATTGCTATGAAAGTGGATTCCGCGGCTTActtgtcgtcgtcatccttgtagtca
|
Fasta |