Clone: 0864533050210965 A09

Tagged gene: CG5613
Identifier: FBgn0030839

Clone FlyFos018930(pRedFlp-Hgr)(CG5613[41333]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
17291534 17297312 10238 16016 + gene B-H1 coding_transcript
17307830 17316188 26534 34892 - gene CG8611 coding_transcript
17317624 17322767 36328 42533 + gene CG5613 coding_transcript
17317624 17322767 36328 42533 + mrna FBtr0074431 coding_transcript
17317624 17317889 36328 36593 + exon coding_transcript
17317624 17317657 36328 36361 + five_prime_utr coding_transcript
17317658 17317889 36362 36593 + cds coding_transcript
17317890 17320128 36594 38832 + intron coding_transcript
17320032 17322767 38736 42533 + mrna FBtr0074432 coding_transcript
17320032 17320366 38736 39070 + exon coding_transcript
17320032 17320085 38736 38789 + five_prime_utr coding_transcript
17320086 17320366 38790 39070 + cds coding_transcript
17320129 17320366 38833 39070 + exon coding_transcript
17320129 17320366 38833 39070 + cds coding_transcript
17320367 17320632 39071 39336 + intron coding_transcript
17320367 17320632 39071 39336 + intron coding_transcript
17320633 17320950 39337 39654 + exon coding_transcript
17320633 17320950 39337 39654 + cds coding_transcript
17320633 17320950 39337 39654 + exon coding_transcript
17320633 17320950 39337 39654 + cds coding_transcript
17320951 17321452 39655 40156 + intron coding_transcript
17320951 17321452 39655 40156 + intron coding_transcript
17321453 17322767 40157 42533 + exon coding_transcript
17321453 17322767 40157 42533 + exon coding_transcript
17321453 17322632 40157 42398 + cds coding_transcript
17321453 17322632 40157 42398 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 41334 41393 + cds 2xTY1 CLC
1548 2264 41400 42116 + cds SGFP CLC
2271 2312 42123 42164 + cds V5 CLC
2313 2336 42165 42188 + cds Precision cut site CLC
2337 2357 42189 42209 + cds TEV CLC
2358 2429 42210 42281 + cds BLRP CLC
3813 3846 42289 42322 + misc_recomb FRT CLC
dmel-5.43-X
17322633 17322767 42399 42533 + three_prime_utr coding_transcript
17322633 17322767 42399 42533 + three_prime_utr coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5613[41333]::S000169_fly_pretag_fwd
GGACAGATATTCCAGTCTACAGCAAACACATGTGGAATGAGCAGCGAGCTgaagtgcataccaatcaggacccgc
 fasta Fasta
CG5613[41333]::S000169_fly_pretag_rev
TAATGTATAAAAAAATTAAGTTCTTATTTACACAAGCAACTTGGGCTTCActtgtcgtcgtcatccttgtagtca
 fasta Fasta