Clone: 10123066965770744 F10
Tagged gene: CG30187
Identifier: FBgn0050187
Clone | FlyFos017021(pRedFlp-Hgr)(CG30187[40781]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
18830732 | 18832673 | 12562 | 14503 | - | gene | CG42694 | coding_transcript | |
18826510 | 18828633 | 16602 | 18725 | + | gene | CG3831 | coding_transcript | |
18824802 | 18826548 | 18687 | 20433 | - | gene | CG9849 | coding_transcript | |
18822092 | 18824453 | 20782 | 23143 | + | gene | CG3800 | coding_transcript | |
18819558 | 18821208 | 24027 | 25677 | + | gene | CG3788 | coding_transcript | |
18812613 | 18819567 | 25668 | 32622 | - | gene | CG42678 | coding_transcript | |
18806459 | 18812255 | 32980 | 38776 | + | gene | Nup214 | coding_transcript | |
18804366 | 18806289 | 38946 | 41931 | + | gene | CG30187 | coding_transcript | |
18804366 | 18806289 | 38946 | 41931 | + | mrna | FBtr0301927 | coding_transcript | |
18804366 | 18806289 | 38946 | 41931 | + | mrna | FBtr0304796 | coding_transcript | |
18806091 | 18806289 | 38946 | 39144 | + | exon | coding_transcript | ||
18806091 | 18806289 | 38946 | 39144 | + | exon | coding_transcript | ||
18806149 | 18806289 | 38946 | 39086 | + | five_prime_utr | coding_transcript | ||
18806149 | 18806289 | 38946 | 39086 | + | five_prime_utr | coding_transcript | ||
18806091 | 18806148 | 39087 | 39144 | + | cds | coding_transcript | ||
18806091 | 18806148 | 39087 | 39144 | + | cds | coding_transcript | ||
18806035 | 18806090 | 39145 | 39200 | + | intron | coding_transcript | ||
18806035 | 18806090 | 39145 | 39200 | + | intron | coding_transcript | ||
18805989 | 18806034 | 39201 | 39246 | + | exon | coding_transcript | ||
18805989 | 18806034 | 39201 | 39246 | + | cds | coding_transcript | ||
18805989 | 18806034 | 39201 | 39246 | + | exon | coding_transcript | ||
18805989 | 18806034 | 39201 | 39246 | + | cds | coding_transcript | ||
18805932 | 18805988 | 39247 | 39303 | + | intron | coding_transcript | ||
18805932 | 18805988 | 39247 | 39303 | + | intron | coding_transcript | ||
18805783 | 18805931 | 39304 | 39452 | + | exon | coding_transcript | ||
18805783 | 18805931 | 39304 | 39452 | + | cds | coding_transcript | ||
18805783 | 18805931 | 39304 | 39452 | + | exon | coding_transcript | ||
18805783 | 18805931 | 39304 | 39452 | + | cds | coding_transcript | ||
18805721 | 18805782 | 39453 | 39514 | + | intron | coding_transcript | ||
18805721 | 18805782 | 39453 | 39514 | + | intron | coding_transcript | ||
18805157 | 18805720 | 39515 | 40078 | + | exon | coding_transcript | ||
18805157 | 18805720 | 39515 | 40078 | + | cds | coding_transcript | ||
18805157 | 18805720 | 39515 | 40078 | + | exon | coding_transcript | ||
18805157 | 18805720 | 39515 | 40078 | + | cds | coding_transcript | ||
18805073 | 18805156 | 40079 | 40162 | + | intron | coding_transcript | ||
18805106 | 18805156 | 40079 | 40129 | + | intron | coding_transcript | ||
18805057 | 18805105 | 40130 | 40178 | + | exon | coding_transcript | ||
18805057 | 18805105 | 40130 | 40178 | + | cds | coding_transcript | ||
18805057 | 18805072 | 40163 | 40178 | + | exon | coding_transcript | ||
18805057 | 18805072 | 40163 | 40178 | + | cds | coding_transcript | ||
18804993 | 18805056 | 40179 | 40242 | + | intron | coding_transcript | ||
18804993 | 18805056 | 40179 | 40242 | + | intron | coding_transcript | ||
18804874 | 18804992 | 40243 | 40361 | + | exon | coding_transcript | ||
18804874 | 18804992 | 40243 | 40361 | + | cds | coding_transcript | ||
18804874 | 18804992 | 40243 | 40361 | + | exon | coding_transcript | ||
18804874 | 18804992 | 40243 | 40361 | + | cds | coding_transcript | ||
18804822 | 18804873 | 40362 | 40413 | + | intron | coding_transcript | ||
18804822 | 18804873 | 40362 | 40413 | + | intron | coding_transcript | ||
18804366 | 18804821 | 40414 | 41931 | + | exon | coding_transcript | ||
18804366 | 18804821 | 40414 | 41931 | + | exon | coding_transcript | ||
18804451 | 18804821 | 40414 | 41846 | + | cds | coding_transcript | ||
18804451 | 18804821 | 40414 | 41846 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 40782 | 40841 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 40848 | 41564 | + | cds | SGFP | CLC | |
2271 | 2312 | 41571 | 41612 | + | cds | V5 | CLC | |
2313 | 2336 | 41613 | 41636 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 41637 | 41657 | + | cds | TEV | CLC | |
2358 | 2429 | 41658 | 41729 | + | cds | BLRP | CLC | |
3813 | 3846 | 41737 | 41770 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2R | ||||||||
18804366 | 18804450 | 41847 | 41931 | + | three_prime_utr | coding_transcript | ||
18804366 | 18804450 | 41847 | 41931 | + | three_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG30187[40781]::S000169_fly_pretag_fwd
CAAACGTTATGAAGTTATCGGAATGGATTGCAAATACGATAAGGATTAACgaagtgcataccaatcaggacccgc
|
Fasta |
CG30187[40781]::S000169_fly_pretag_rev
AAATGGATTATATGTTCGGCTAGCGCATATCGAGTTGATCTCTAAAGTTActtgtcgtcgtcatccttgtagtca
|
Fasta |