Clone: 10123066965770744 D09
Tagged gene: alpha-Est5
Identifier: FBgn0261393
Clone | FlyFos017010(pRedFlp-Hgr)(alpha-Est5[22536]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
3350289 | 3354499 | 12837 | 17047 | - | gene | alpha-Est6 | coding_transcript | |
3354586 | 3355963 | 17134 | 18511 | - | gene | Rtnl2 | coding_transcript | |
3356478 | 3358454 | 19026 | 21002 | + | gene | alphaTub84D | coding_transcript | |
3359218 | 3362247 | 21766 | 25857 | - | gene | alpha-Est5 | coding_transcript | |
3359218 | 3362247 | 21766 | 25857 | - | mrna | FBtr0307274 | coding_transcript | |
3359218 | 3360438 | 21766 | 24048 | - | exon | coding_transcript | ||
3359218 | 3359985 | 21766 | 22533 | - | three_prime_utr | coding_transcript | ||
3359951 | 3362247 | 22499 | 25857 | - | mrna | FBtr0081547 | coding_transcript | |
3359951 | 3360438 | 22499 | 24048 | - | exon | coding_transcript | ||
3359951 | 3359985 | 22499 | 22533 | - | three_prime_utr | coding_transcript | ||
3359986 | 3360438 | 22534 | 24048 | - | cds | coding_transcript | ||
3359986 | 3360438 | 22534 | 24048 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 22610 | 22643 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 22651 | 22722 | - | cds | BLRP | CLC | |
2337 | 2357 | 22723 | 22743 | - | cds | TEV | CLC | |
2313 | 2336 | 22744 | 22767 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 22768 | 22809 | - | cds | V5 | CLC | |
1548 | 2264 | 22816 | 23532 | - | cds | SGFP | CLC | |
1482 | 1541 | 23539 | 23598 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3R | ||||||||
3360439 | 3360523 | 24049 | 24133 | - | intron | coding_transcript | ||
3360439 | 3360523 | 24049 | 24133 | - | intron | coding_transcript | ||
3360524 | 3361257 | 24134 | 24867 | - | exon | coding_transcript | ||
3360524 | 3361257 | 24134 | 24867 | - | cds | coding_transcript | ||
3360524 | 3361257 | 24134 | 24867 | - | exon | coding_transcript | ||
3360524 | 3361257 | 24134 | 24867 | - | cds | coding_transcript | ||
3361258 | 3361454 | 24868 | 25064 | - | intron | coding_transcript | ||
3361258 | 3361454 | 24868 | 25064 | - | intron | coding_transcript | ||
3361455 | 3361605 | 25065 | 25215 | - | exon | coding_transcript | ||
3361455 | 3361605 | 25065 | 25215 | - | cds | coding_transcript | ||
3361455 | 3361605 | 25065 | 25215 | - | exon | coding_transcript | ||
3361455 | 3361605 | 25065 | 25215 | - | cds | coding_transcript | ||
3361606 | 3361667 | 25216 | 25277 | - | intron | coding_transcript | ||
3361606 | 3361667 | 25216 | 25277 | - | intron | coding_transcript | ||
3361668 | 3361944 | 25278 | 25554 | - | exon | coding_transcript | ||
3361668 | 3361944 | 25278 | 25554 | - | cds | coding_transcript | ||
3361668 | 3361941 | 25278 | 25551 | - | exon | coding_transcript | ||
3361668 | 3361941 | 25278 | 25551 | - | cds | coding_transcript | ||
3361942 | 3362005 | 25552 | 25615 | - | intron | coding_transcript | ||
3361945 | 3362005 | 25555 | 25615 | - | intron | coding_transcript | ||
3362006 | 3362247 | 25616 | 25857 | - | exon | coding_transcript | ||
3362006 | 3362247 | 25616 | 25857 | - | exon | coding_transcript | ||
3362006 | 3362022 | 25616 | 25632 | - | cds | coding_transcript | ||
3362006 | 3362022 | 25616 | 25632 | - | cds | coding_transcript | ||
3362023 | 3362247 | 25633 | 25857 | - | five_prime_utr | coding_transcript | ||
3362023 | 3362247 | 25633 | 25857 | - | five_prime_utr | coding_transcript | ||
3362409 | 3364333 | 26019 | 27943 | - | gene | alpha-Est4 | coding_transcript | |
3364694 | 3367349 | 28304 | 30959 | - | gene | alpha-Est3 | coding_transcript | |
3367533 | 3370952 | 31143 | 34562 | + | gene | alpha-Est2 | coding_transcript | |
3371455 | 3374844 | 35065 | 38454 | - | gene | alpha-Est1 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
alpha-Est5[22536]::S000169_fly_pretag_fwd
ATGAAAAACTACAAATTTGGGACAACTTGTATAAGCCAAATCAATTGATCgaagtgcataccaatcaggacccgc
|
Fasta |
alpha-Est5[22536]::S000169_fly_pretag_rev
AAGCAGTACTTTAGTGAACATTAATGCATGGAAATTTATTTGCATGCTTActtgtcgtcgtcatccttgtagtca
|
Fasta |