Clone: 10123066965770744 A07
Tagged gene: clos
Identifier: FBgn0261016
Clone | FlyFos016990(pRedFlp-Hgr)(clos[38629]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
5495633 | 5497792 | 16351 | 18510 | + | gene | CG12926 | coding_transcript | |
5494797 | 5495855 | 18288 | 19346 | - | gene | CG30005 | coding_transcript | |
5493495 | 5494689 | 19454 | 20648 | - | gene | CG30000 | coding_transcript | |
5481588 | 5493129 | 21014 | 32555 | - | gene | CG1902 | coding_transcript | |
5488936 | 5490406 | 23737 | 25207 | + | gene | CG30339 | coding_transcript | |
5487414 | 5488716 | 25427 | 26729 | + | gene | CG30340 | coding_transcript | |
5475458 | 5487237 | 26906 | 39747 | + | gene | clos | coding_transcript | |
5475458 | 5487237 | 26906 | 39747 | + | mrna | FBtr0305178 | coding_transcript | |
5487015 | 5487237 | 26906 | 27128 | + | exon | coding_transcript | ||
5487181 | 5487237 | 26906 | 26962 | + | five_prime_utr | coding_transcript | ||
5487015 | 5487180 | 26963 | 27128 | + | cds | coding_transcript | ||
5485931 | 5487014 | 27129 | 28212 | + | intron | coding_transcript | ||
5481552 | 5487010 | 27133 | 32591 | - | gene | CG30338 | coding_transcript | |
5481552 | 5487010 | 27133 | 32591 | - | mrna | FBtr0088533 | coding_transcript | |
5486087 | 5487010 | 27133 | 28056 | - | exon | coding_transcript | ||
5486956 | 5487010 | 27133 | 27187 | - | three_prime_utr | coding_transcript | ||
5486089 | 5486955 | 27188 | 28054 | - | cds | coding_transcript | ||
5486087 | 5486088 | 28055 | 28056 | - | five_prime_utr | coding_transcript | ||
5481665 | 5486086 | 28057 | 32478 | - | intron | coding_transcript | ||
5485077 | 5485930 | 28213 | 29066 | + | exon | coding_transcript | ||
5485077 | 5485930 | 28213 | 29066 | + | cds | coding_transcript | ||
5485025 | 5485076 | 29067 | 29118 | + | intron | coding_transcript | ||
5484850 | 5485024 | 29119 | 29293 | + | exon | coding_transcript | ||
5484850 | 5485024 | 29119 | 29293 | + | cds | coding_transcript | ||
5484797 | 5484849 | 29294 | 29346 | + | intron | coding_transcript | ||
5484630 | 5484796 | 29347 | 29513 | + | exon | coding_transcript | ||
5484630 | 5484796 | 29347 | 29513 | + | cds | coding_transcript | ||
5484573 | 5484629 | 29514 | 29570 | + | intron | coding_transcript | ||
5484507 | 5484572 | 29571 | 29636 | + | exon | coding_transcript | ||
5484507 | 5484572 | 29571 | 29636 | + | cds | coding_transcript | ||
5484454 | 5484506 | 29637 | 29689 | + | intron | coding_transcript | ||
5483719 | 5484453 | 29690 | 30424 | + | exon | coding_transcript | ||
5483719 | 5484453 | 29690 | 30424 | + | cds | coding_transcript | ||
5483663 | 5483718 | 30425 | 30480 | + | intron | coding_transcript | ||
5482573 | 5483662 | 30481 | 31570 | + | exon | coding_transcript | ||
5482573 | 5483662 | 30481 | 31570 | + | cds | coding_transcript | ||
5482518 | 5482572 | 31571 | 31625 | + | intron | coding_transcript | ||
5482135 | 5482517 | 31626 | 32008 | + | exon | coding_transcript | ||
5482135 | 5482517 | 31626 | 32008 | + | cds | coding_transcript | ||
5482076 | 5482134 | 32009 | 32067 | + | intron | coding_transcript | ||
5481894 | 5482075 | 32068 | 32249 | + | exon | coding_transcript | ||
5481894 | 5482075 | 32068 | 32249 | + | cds | coding_transcript | ||
5481268 | 5481893 | 32250 | 32875 | + | intron | coding_transcript | ||
5481552 | 5481664 | 32479 | 32591 | - | exon | coding_transcript | ||
5481552 | 5481664 | 32479 | 32591 | - | five_prime_utr | coding_transcript | ||
5481588 | 5481664 | 32479 | 32555 | - | exon | coding_transcript | ||
5481588 | 5481664 | 32479 | 32555 | - | five_prime_utr | coding_transcript | ||
5480495 | 5481267 | 32876 | 33648 | + | exon | coding_transcript | ||
5480495 | 5481267 | 32876 | 33648 | + | cds | coding_transcript | ||
5480432 | 5480494 | 33649 | 33711 | + | intron | coding_transcript | ||
5480252 | 5480431 | 33712 | 33891 | + | exon | coding_transcript | ||
5480252 | 5480431 | 33712 | 33891 | + | cds | coding_transcript | ||
5476311 | 5480251 | 33892 | 37832 | + | intron | coding_transcript | ||
5478331 | 5480249 | 33894 | 35812 | - | gene | Map60 | coding_transcript | |
5478331 | 5480249 | 33894 | 35812 | - | mrna | FBtr0088530 | coding_transcript | |
5478870 | 5480249 | 33894 | 35273 | - | exon | coding_transcript | ||
5479921 | 5480249 | 33894 | 34222 | - | three_prime_utr | coding_transcript | ||
5478870 | 5479920 | 34223 | 35273 | - | cds | coding_transcript | ||
5478806 | 5478869 | 35274 | 35337 | - | intron | coding_transcript | ||
5478331 | 5478805 | 35338 | 35812 | - | exon | coding_transcript | ||
5478534 | 5478805 | 35338 | 35609 | - | cds | coding_transcript | ||
5478331 | 5478533 | 35610 | 35812 | - | five_prime_utr | coding_transcript | ||
5476611 | 5477948 | 36195 | 37532 | - | gene | CG1827 | coding_transcript | |
5476611 | 5477948 | 36195 | 37532 | - | mrna | FBtr0273243 | coding_transcript | |
5476621 | 5477948 | 36195 | 37522 | - | mrna | FBtr0088529 | coding_transcript | |
5476621 | 5477948 | 36195 | 37522 | - | exon | coding_transcript | ||
5476821 | 5477948 | 36195 | 37322 | - | exon | coding_transcript | ||
5477890 | 5477948 | 36195 | 36253 | - | three_prime_utr | coding_transcript | ||
5477890 | 5477948 | 36195 | 36253 | - | three_prime_utr | coding_transcript | ||
5476821 | 5477889 | 36254 | 37322 | - | cds | coding_transcript | ||
5476879 | 5477889 | 36254 | 37264 | - | cds | coding_transcript | ||
5476621 | 5476878 | 37265 | 37522 | - | five_prime_utr | coding_transcript | ||
5476768 | 5476820 | 37323 | 37375 | - | intron | coding_transcript | ||
5476611 | 5476767 | 37376 | 37532 | - | exon | coding_transcript | ||
5476703 | 5476767 | 37376 | 37440 | - | cds | coding_transcript | ||
5476611 | 5476702 | 37441 | 37532 | - | five_prime_utr | coding_transcript | ||
5475896 | 5476310 | 37833 | 38247 | + | exon | coding_transcript | ||
5475896 | 5476310 | 37833 | 38247 | + | cds | coding_transcript | ||
5475836 | 5475895 | 38248 | 38307 | + | intron | coding_transcript | ||
5475458 | 5475835 | 38308 | 39747 | + | exon | coding_transcript | ||
5475511 | 5475835 | 38308 | 39694 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 38630 | 38689 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 38696 | 39412 | + | cds | SGFP | CLC | |
2271 | 2312 | 39419 | 39460 | + | cds | V5 | CLC | |
2313 | 2336 | 39461 | 39484 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 39485 | 39505 | + | cds | TEV | CLC | |
2358 | 2429 | 39506 | 39577 | + | cds | BLRP | CLC | |
3813 | 3846 | 39585 | 39618 | + | misc_recomb | FRT | CLC | |
dmel-5.43-2R | ||||||||
5475458 | 5475510 | 39695 | 39747 | + | three_prime_utr | coding_transcript | ||
5474688 | 5475505 | 39700 | 40517 | - | gene | RpL31 | coding_transcript | |
5473615 | 5474180 | 41025 | 41590 | + | gene | CG12929 | coding_transcript | |
5472172 | 5473623 | 41582 | 43033 | - | gene | Updo | coding_transcript | |
5469261 | 5472050 | 43155 | 45944 | + | gene | CG1868 | coding_transcript | |
5464932 | 5469352 | 45853 | 50273 | - | gene | CG1814 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
clos[38629]::S000169_fly_pretag_rev
TAATAAAAAGTAATTTTTATTTAGAAAAAACAAACAAAACAAGTGACTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
clos[38629]::S000169_fly_pretag_fwd
TGGCCACGGAGGAGTCGGTCTACTTGCTGCAGCCACAGTTTACTACACTTgaagtgcataccaatcaggacccgc
|
Fasta |