Clone: 10123066965770744 A07

Tagged gene: clos
Identifier: FBgn0261016

Clone FlyFos016990(pRedFlp-Hgr)(clos[38629]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
5495633 5497792 16351 18510 + gene CG12926 coding_transcript
5494797 5495855 18288 19346 - gene CG30005 coding_transcript
5493495 5494689 19454 20648 - gene CG30000 coding_transcript
5481588 5493129 21014 32555 - gene CG1902 coding_transcript
5488936 5490406 23737 25207 + gene CG30339 coding_transcript
5487414 5488716 25427 26729 + gene CG30340 coding_transcript
5475458 5487237 26906 39747 + gene clos coding_transcript
5475458 5487237 26906 39747 + mrna FBtr0305178 coding_transcript
5487015 5487237 26906 27128 + exon coding_transcript
5487181 5487237 26906 26962 + five_prime_utr coding_transcript
5487015 5487180 26963 27128 + cds coding_transcript
5485931 5487014 27129 28212 + intron coding_transcript
5481552 5487010 27133 32591 - gene CG30338 coding_transcript
5481552 5487010 27133 32591 - mrna FBtr0088533 coding_transcript
5486087 5487010 27133 28056 - exon coding_transcript
5486956 5487010 27133 27187 - three_prime_utr coding_transcript
5486089 5486955 27188 28054 - cds coding_transcript
5486087 5486088 28055 28056 - five_prime_utr coding_transcript
5481665 5486086 28057 32478 - intron coding_transcript
5485077 5485930 28213 29066 + exon coding_transcript
5485077 5485930 28213 29066 + cds coding_transcript
5485025 5485076 29067 29118 + intron coding_transcript
5484850 5485024 29119 29293 + exon coding_transcript
5484850 5485024 29119 29293 + cds coding_transcript
5484797 5484849 29294 29346 + intron coding_transcript
5484630 5484796 29347 29513 + exon coding_transcript
5484630 5484796 29347 29513 + cds coding_transcript
5484573 5484629 29514 29570 + intron coding_transcript
5484507 5484572 29571 29636 + exon coding_transcript
5484507 5484572 29571 29636 + cds coding_transcript
5484454 5484506 29637 29689 + intron coding_transcript
5483719 5484453 29690 30424 + exon coding_transcript
5483719 5484453 29690 30424 + cds coding_transcript
5483663 5483718 30425 30480 + intron coding_transcript
5482573 5483662 30481 31570 + exon coding_transcript
5482573 5483662 30481 31570 + cds coding_transcript
5482518 5482572 31571 31625 + intron coding_transcript
5482135 5482517 31626 32008 + exon coding_transcript
5482135 5482517 31626 32008 + cds coding_transcript
5482076 5482134 32009 32067 + intron coding_transcript
5481894 5482075 32068 32249 + exon coding_transcript
5481894 5482075 32068 32249 + cds coding_transcript
5481268 5481893 32250 32875 + intron coding_transcript
5481552 5481664 32479 32591 - exon coding_transcript
5481552 5481664 32479 32591 - five_prime_utr coding_transcript
5481588 5481664 32479 32555 - exon coding_transcript
5481588 5481664 32479 32555 - five_prime_utr coding_transcript
5480495 5481267 32876 33648 + exon coding_transcript
5480495 5481267 32876 33648 + cds coding_transcript
5480432 5480494 33649 33711 + intron coding_transcript
5480252 5480431 33712 33891 + exon coding_transcript
5480252 5480431 33712 33891 + cds coding_transcript
5476311 5480251 33892 37832 + intron coding_transcript
5478331 5480249 33894 35812 - gene Map60 coding_transcript
5478331 5480249 33894 35812 - mrna FBtr0088530 coding_transcript
5478870 5480249 33894 35273 - exon coding_transcript
5479921 5480249 33894 34222 - three_prime_utr coding_transcript
5478870 5479920 34223 35273 - cds coding_transcript
5478806 5478869 35274 35337 - intron coding_transcript
5478331 5478805 35338 35812 - exon coding_transcript
5478534 5478805 35338 35609 - cds coding_transcript
5478331 5478533 35610 35812 - five_prime_utr coding_transcript
5476611 5477948 36195 37532 - gene CG1827 coding_transcript
5476611 5477948 36195 37532 - mrna FBtr0273243 coding_transcript
5476621 5477948 36195 37522 - mrna FBtr0088529 coding_transcript
5476621 5477948 36195 37522 - exon coding_transcript
5476821 5477948 36195 37322 - exon coding_transcript
5477890 5477948 36195 36253 - three_prime_utr coding_transcript
5477890 5477948 36195 36253 - three_prime_utr coding_transcript
5476821 5477889 36254 37322 - cds coding_transcript
5476879 5477889 36254 37264 - cds coding_transcript
5476621 5476878 37265 37522 - five_prime_utr coding_transcript
5476768 5476820 37323 37375 - intron coding_transcript
5476611 5476767 37376 37532 - exon coding_transcript
5476703 5476767 37376 37440 - cds coding_transcript
5476611 5476702 37441 37532 - five_prime_utr coding_transcript
5475896 5476310 37833 38247 + exon coding_transcript
5475896 5476310 37833 38247 + cds coding_transcript
5475836 5475895 38248 38307 + intron coding_transcript
5475458 5475835 38308 39747 + exon coding_transcript
5475511 5475835 38308 39694 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 38630 38689 + cds 2xTY1 CLC
1548 2264 38696 39412 + cds SGFP CLC
2271 2312 39419 39460 + cds V5 CLC
2313 2336 39461 39484 + cds Precision cut site CLC
2337 2357 39485 39505 + cds TEV CLC
2358 2429 39506 39577 + cds BLRP CLC
3813 3846 39585 39618 + misc_recomb FRT CLC
dmel-5.43-2R
5475458 5475510 39695 39747 + three_prime_utr coding_transcript
5474688 5475505 39700 40517 - gene RpL31 coding_transcript
5473615 5474180 41025 41590 + gene CG12929 coding_transcript
5472172 5473623 41582 43033 - gene Updo coding_transcript
5469261 5472050 43155 45944 + gene CG1868 coding_transcript
5464932 5469352 45853 50273 - gene CG1814 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
clos[38629]::S000169_fly_pretag_rev
TAATAAAAAGTAATTTTTATTTAGAAAAAACAAACAAAACAAGTGACTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
clos[38629]::S000169_fly_pretag_fwd
TGGCCACGGAGGAGTCGGTCTACTTGCTGCAGCCACAGTTTACTACACTTgaagtgcataccaatcaggacccgc
fasta Fasta