Clone: 10123066965770744 H06
Tagged gene: CG1902
Identifier: FBgn0033434
Clone | FlyFos016990(pRedFlp-Hgr)(CG1902[21698]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
5495633 | 5497792 | 16351 | 18510 | + | gene | CG12926 | coding_transcript | |
5494797 | 5495855 | 18288 | 19346 | - | gene | CG30005 | coding_transcript | |
5493495 | 5494689 | 19454 | 20648 | - | gene | CG30000 | coding_transcript | |
5481588 | 5493129 | 21014 | 33617 | - | gene | CG1902 | coding_transcript | |
5481588 | 5493129 | 21014 | 33617 | - | mrna | FBtr0088531 | coding_transcript | |
5491228 | 5493129 | 21014 | 23977 | - | mrna | FBtr0088532 | coding_transcript | |
5492175 | 5493129 | 21014 | 23030 | - | exon | coding_transcript | ||
5492175 | 5493129 | 21014 | 23030 | - | exon | coding_transcript | ||
5492448 | 5493129 | 21014 | 21695 | - | three_prime_utr | coding_transcript | ||
5492448 | 5493129 | 21014 | 21695 | - | three_prime_utr | coding_transcript | ||
5492175 | 5492447 | 21696 | 23030 | - | cds | coding_transcript | ||
5492175 | 5492447 | 21696 | 23030 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 21772 | 21805 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 21813 | 21884 | - | cds | BLRP | CLC | |
2337 | 2357 | 21885 | 21905 | - | cds | TEV | CLC | |
2313 | 2336 | 21906 | 21929 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 21930 | 21971 | - | cds | V5 | CLC | |
1548 | 2264 | 21978 | 22694 | - | cds | SGFP | CLC | |
1482 | 1541 | 22701 | 22760 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
5492117 | 5492174 | 23031 | 23088 | - | intron | coding_transcript | ||
5492117 | 5492174 | 23031 | 23088 | - | intron | coding_transcript | ||
5491750 | 5492116 | 23089 | 23455 | - | exon | coding_transcript | ||
5491750 | 5492116 | 23089 | 23455 | - | cds | coding_transcript | ||
5491750 | 5492116 | 23089 | 23455 | - | exon | coding_transcript | ||
5491750 | 5492116 | 23089 | 23455 | - | cds | coding_transcript | ||
5491686 | 5491749 | 23456 | 23519 | - | intron | coding_transcript | ||
5491686 | 5491749 | 23456 | 23519 | - | intron | coding_transcript | ||
5491228 | 5491685 | 23520 | 23977 | - | exon | coding_transcript | ||
5491374 | 5491685 | 23520 | 23831 | - | exon | coding_transcript | ||
5491387 | 5491685 | 23520 | 23818 | - | cds | coding_transcript | ||
5491387 | 5491685 | 23520 | 23818 | - | cds | coding_transcript | ||
5491228 | 5491386 | 23819 | 23977 | - | five_prime_utr | coding_transcript | ||
5491374 | 5491386 | 23819 | 23831 | - | five_prime_utr | coding_transcript | ||
5481665 | 5491373 | 23832 | 33540 | - | intron | coding_transcript | ||
5488936 | 5490406 | 24799 | 26269 | + | gene | CG30339 | coding_transcript | |
5488936 | 5490406 | 24799 | 26269 | + | mrna | FBtr0088534 | coding_transcript | |
5490067 | 5490406 | 24799 | 25138 | + | exon | coding_transcript | ||
5490366 | 5490406 | 24799 | 24839 | + | five_prime_utr | coding_transcript | ||
5490067 | 5490365 | 24840 | 25138 | + | cds | coding_transcript | ||
5490005 | 5490066 | 25139 | 25200 | + | intron | coding_transcript | ||
5489632 | 5490004 | 25201 | 25573 | + | exon | coding_transcript | ||
5489632 | 5490004 | 25201 | 25573 | + | cds | coding_transcript | ||
5489246 | 5489631 | 25574 | 25959 | + | intron | coding_transcript | ||
5488936 | 5489245 | 25960 | 26269 | + | exon | coding_transcript | ||
5488991 | 5489245 | 25960 | 26214 | + | cds | coding_transcript | ||
5488936 | 5488990 | 26215 | 26269 | + | three_prime_utr | coding_transcript | ||
5487414 | 5488716 | 26489 | 27791 | + | gene | CG30340 | coding_transcript | |
5487414 | 5488716 | 26489 | 27791 | + | mrna | FBtr0088535 | coding_transcript | |
5488690 | 5488716 | 26489 | 26515 | + | exon | coding_transcript | ||
5488690 | 5488716 | 26489 | 26515 | + | cds | coding_transcript | ||
5488637 | 5488689 | 26516 | 26568 | + | intron | coding_transcript | ||
5488007 | 5488636 | 26569 | 27198 | + | exon | coding_transcript | ||
5488007 | 5488636 | 26569 | 27198 | + | cds | coding_transcript | ||
5487948 | 5488006 | 27199 | 27257 | + | intron | coding_transcript | ||
5487414 | 5487947 | 27258 | 27791 | + | exon | coding_transcript | ||
5487414 | 5487947 | 27258 | 27791 | + | cds | coding_transcript | ||
5475458 | 5487237 | 27968 | 39747 | + | gene | clos | coding_transcript | |
5487015 | 5487237 | 27968 | 28190 | + | exon | coding_transcript | ||
5487181 | 5487237 | 27968 | 28024 | + | five_prime_utr | coding_transcript | ||
5487015 | 5487180 | 28025 | 28190 | + | cds | coding_transcript | ||
5485931 | 5487014 | 28191 | 29274 | + | intron | coding_transcript | ||
5481552 | 5487010 | 28195 | 33653 | - | gene | CG30338 | coding_transcript | |
5486087 | 5487010 | 28195 | 29118 | - | exon | coding_transcript | ||
5486956 | 5487010 | 28195 | 28249 | - | three_prime_utr | coding_transcript | ||
5486089 | 5486955 | 28250 | 29116 | - | cds | coding_transcript | ||
5486087 | 5486088 | 29117 | 29118 | - | five_prime_utr | coding_transcript | ||
5481665 | 5486086 | 29119 | 33540 | - | intron | coding_transcript | ||
5485077 | 5485930 | 29275 | 30128 | + | exon | coding_transcript | ||
5485077 | 5485930 | 29275 | 30128 | + | cds | coding_transcript | ||
5485025 | 5485076 | 30129 | 30180 | + | intron | coding_transcript | ||
5484850 | 5485024 | 30181 | 30355 | + | exon | coding_transcript | ||
5484850 | 5485024 | 30181 | 30355 | + | cds | coding_transcript | ||
5484797 | 5484849 | 30356 | 30408 | + | intron | coding_transcript | ||
5484630 | 5484796 | 30409 | 30575 | + | exon | coding_transcript | ||
5484630 | 5484796 | 30409 | 30575 | + | cds | coding_transcript | ||
5484573 | 5484629 | 30576 | 30632 | + | intron | coding_transcript | ||
5484507 | 5484572 | 30633 | 30698 | + | exon | coding_transcript | ||
5484507 | 5484572 | 30633 | 30698 | + | cds | coding_transcript | ||
5484454 | 5484506 | 30699 | 30751 | + | intron | coding_transcript | ||
5483719 | 5484453 | 30752 | 31486 | + | exon | coding_transcript | ||
5483719 | 5484453 | 30752 | 31486 | + | cds | coding_transcript | ||
5483663 | 5483718 | 31487 | 31542 | + | intron | coding_transcript | ||
5482573 | 5483662 | 31543 | 32632 | + | exon | coding_transcript | ||
5482573 | 5483662 | 31543 | 32632 | + | cds | coding_transcript | ||
5482518 | 5482572 | 32633 | 32687 | + | intron | coding_transcript | ||
5482135 | 5482517 | 32688 | 33070 | + | exon | coding_transcript | ||
5482135 | 5482517 | 32688 | 33070 | + | cds | coding_transcript | ||
5482076 | 5482134 | 33071 | 33129 | + | intron | coding_transcript | ||
5481894 | 5482075 | 33130 | 33311 | + | exon | coding_transcript | ||
5481894 | 5482075 | 33130 | 33311 | + | cds | coding_transcript | ||
5481588 | 5481664 | 33541 | 33617 | - | exon | coding_transcript | ||
5481588 | 5481664 | 33541 | 33617 | - | five_prime_utr | coding_transcript | ||
5478331 | 5480249 | 34956 | 36874 | - | gene | Map60 | coding_transcript | |
5476611 | 5477948 | 37257 | 38594 | - | gene | CG1827 | coding_transcript | |
5474688 | 5475505 | 39700 | 40517 | - | gene | RpL31 | coding_transcript | |
5473615 | 5474180 | 41025 | 41590 | + | gene | CG12929 | coding_transcript | |
5472172 | 5473623 | 41582 | 43033 | - | gene | Updo | coding_transcript | |
5469261 | 5472050 | 43155 | 45944 | + | gene | CG1868 | coding_transcript | |
5464932 | 5469352 | 45853 | 50273 | - | gene | CG1814 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG1902[21698]::S000169_fly_pretag_fwd
TAGTAACCGACGTTCCGAACGACGGAACCTTCCGAATGATTAACTTCGATgaagtgcataccaatcaggacccgc
|
Fasta |
CG1902[21698]::S000169_fly_pretag_rev
CTATAGGATGTGCATCAGAATATACAACTAACTGCCCGATCATTGACTCActtgtcgtcgtcatccttgtagtca
|
Fasta |