Clone: 10123066965770744 D05
Tagged gene: CG12858
Identifier: FBgn0033958
Clone | FlyFos016979(pRedFlp-Hgr)(CG12858[23038]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
10626864 | 10632834 | 21215 | 28247 | - | gene | CG12858 | coding_transcript | |
10626864 | 10632834 | 21215 | 28247 | - | mrna | FBtr0309056 | coding_transcript | |
10626864 | 10628867 | 21215 | 24280 | - | exon | coding_transcript | ||
10626864 | 10628684 | 21215 | 23035 | - | three_prime_utr | coding_transcript | ||
10627871 | 10632834 | 22222 | 28247 | - | mrna | FBtr0087476 | coding_transcript | |
10627871 | 10628867 | 22222 | 24280 | - | exon | coding_transcript | ||
10627871 | 10628684 | 22222 | 23035 | - | three_prime_utr | coding_transcript | ||
10628685 | 10628867 | 23036 | 24280 | - | cds | coding_transcript | ||
10628685 | 10628867 | 23036 | 24280 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 23112 | 23145 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 23153 | 23224 | - | cds | BLRP | CLC | |
2337 | 2357 | 23225 | 23245 | - | cds | TEV | CLC | |
2313 | 2336 | 23246 | 23269 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 23270 | 23311 | - | cds | V5 | CLC | |
1548 | 2264 | 23318 | 24034 | - | cds | SGFP | CLC | |
1482 | 1541 | 24041 | 24100 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
10628868 | 10628971 | 24281 | 24384 | - | intron | coding_transcript | ||
10628868 | 10628971 | 24281 | 24384 | - | intron | coding_transcript | ||
10628972 | 10630174 | 24385 | 25587 | - | exon | coding_transcript | ||
10628972 | 10630174 | 24385 | 25587 | - | cds | coding_transcript | ||
10628972 | 10630174 | 24385 | 25587 | - | exon | coding_transcript | ||
10628972 | 10630174 | 24385 | 25587 | - | cds | coding_transcript | ||
10630175 | 10630558 | 25588 | 25971 | - | intron | coding_transcript | ||
10630175 | 10630558 | 25588 | 25971 | - | intron | coding_transcript | ||
10630559 | 10631213 | 25972 | 26626 | - | exon | coding_transcript | ||
10630559 | 10631213 | 25972 | 26626 | - | cds | coding_transcript | ||
10630559 | 10631213 | 25972 | 26626 | - | exon | coding_transcript | ||
10630559 | 10631213 | 25972 | 26626 | - | cds | coding_transcript | ||
10631214 | 10631275 | 26627 | 26688 | - | intron | coding_transcript | ||
10631214 | 10631275 | 26627 | 26688 | - | intron | coding_transcript | ||
10631276 | 10631697 | 26689 | 27110 | - | exon | coding_transcript | ||
10631276 | 10631697 | 26689 | 27110 | - | exon | coding_transcript | ||
10631276 | 10631523 | 26689 | 26936 | - | cds | coding_transcript | ||
10631276 | 10631523 | 26689 | 26936 | - | cds | coding_transcript | ||
10631524 | 10631697 | 26937 | 27110 | - | five_prime_utr | coding_transcript | ||
10631524 | 10631697 | 26937 | 27110 | - | five_prime_utr | coding_transcript | ||
10631698 | 10632702 | 27111 | 28115 | - | intron | coding_transcript | ||
10631698 | 10632702 | 27111 | 28115 | - | intron | coding_transcript | ||
10632703 | 10632834 | 28116 | 28247 | - | exon | coding_transcript | ||
10632703 | 10632834 | 28116 | 28247 | - | five_prime_utr | coding_transcript | ||
10632703 | 10632834 | 28116 | 28247 | - | exon | coding_transcript | ||
10632703 | 10632834 | 28116 | 28247 | - | five_prime_utr | coding_transcript | ||
10633462 | 10634219 | 28875 | 29632 | + | gene | Dro | coding_transcript | |
10634876 | 10635699 | 30289 | 31112 | + | gene | AttA | coding_transcript | |
10636728 | 10637670 | 32141 | 33083 | + | gene | AttB | coding_transcript | |
10637671 | 10640415 | 33084 | 35828 | - | gene | Rpn6 | coding_transcript | |
10640031 | 10640774 | 35444 | 36187 | + | gene | ave | coding_transcript | |
10640842 | 10643793 | 36255 | 39206 | - | gene | CG10151 | coding_transcript | |
10644026 | 10644577 | 39439 | 39990 | + | gene | CG12859 | coding_transcript | |
10644569 | 10645334 | 39982 | 40747 | - | gene | CG10153 | coding_transcript | |
10645557 | 10647099 | 40970 | 42512 | - | gene | CG12857 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG12858[23038]::S000169_fly_pretag_fwd
GCGGTAATCTGGATATACCCGGTGCCAACCCGCACAATCCTTTCGCTCAGgaagtgcataccaatcaggacccgc
|
Fasta |
CG12858[23038]::S000169_fly_pretag_rev
GTATGAAGATGGGCTGAATGCCGACTCCGGGAAGCCAACGTTCCCGTTTActtgtcgtcgtcatccttgtagtca
|
Fasta |