Clone: 10123066965770744 A05

Tagged gene: CG5861
Identifier: FBgn0015338

Clone FlyFos016969(pRedFlp-Hgr)(CG5861[25642]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
16291284 16291948 10965 11629 + gene CG17329 coding_transcript
16292127 16292970 11808 12651 - gene CG13258 coding_transcript
16294207 16295997 13888 15678 + gene Cyp303a1 coding_transcript
16296049 16299875 15730 19556 - gene heix coding_transcript
16300253 16301765 19934 21446 + gene CG17328 coding_transcript
16301656 16302952 21337 22633 - gene CG5869 coding_transcript
16303260 16305941 22941 25622 + gene c(2)M coding_transcript
16305786 16307275 25467 28018 - gene CG5861 coding_transcript
16305786 16307275 25467 28018 - mrna FBtr0080850 coding_transcript
16305786 16306320 25467 27063 - exon coding_transcript
16305786 16305958 25467 25639 - three_prime_utr coding_transcript
16305959 16306320 25640 27063 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 25716 25749 - misc_recomb FRT CLC
2358 2429 25757 25828 - cds BLRP CLC
2337 2357 25829 25849 - cds TEV CLC
2313 2336 25850 25873 - cds Precision cut site CLC
2271 2312 25874 25915 - cds V5 CLC
1548 2264 25922 26638 - cds SGFP CLC
1482 1541 26645 26704 - cds 2xTY1 CLC
dmel-5.43-2L
16306321 16306514 27064 27257 - intron coding_transcript
16306515 16306623 27258 27366 - exon coding_transcript
16306515 16306623 27258 27366 - cds coding_transcript
16306624 16306693 27367 27436 - intron coding_transcript
16306694 16306832 27437 27575 - exon coding_transcript
16306694 16306832 27437 27575 - cds coding_transcript
16306833 16306940 27576 27683 - intron coding_transcript
16306941 16307275 27684 28018 - exon coding_transcript
16306941 16307014 27684 27757 - cds coding_transcript
16307015 16307275 27758 28018 - five_prime_utr coding_transcript
16307359 16309273 28102 30016 + gene Syx5 coding_transcript
16309594 16310736 30337 31479 - gene cni coding_transcript
16310929 16313097 31672 33840 + gene fzy coding_transcript
16313029 16326101 33772 46844 - gene cact coding_transcript
16327071 16328131 47814 48874 + gene CG4278 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5861[25642]::S000169_fly_pretag_rev
AAACAAGTTACAAAAACAAAGGAATACAGAGTGTTTGGCACAATTGCTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG5861[25642]::S000169_fly_pretag_fwd
GATTCTGCACGCTGCACATCTATTCGGGTCTGGCCCAGCAGATCGGAATTgaagtgcataccaatcaggacccgc
fasta Fasta