Clone: 10123066965770744 C03

Tagged gene: CG5493
Identifier: FBgn0034364

Clone FlyFos016960(pRedFlp-Hgr)(CG5493[20803]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2R
14499150 14500235 15502 16587 - gene CG42697 coding_transcript
14500587 14501759 16939 18111 + gene CG10927 coding_transcript
14501715 14502521 18067 18873 - gene mRpS28 coding_transcript
14502587 14503504 18939 19856 + gene CG5323 coding_transcript
14503493 14505823 19845 23237 + gene CG5327 coding_transcript
14504197 14506832 20549 24246 - gene CG5493 coding_transcript
14504197 14506832 20549 24246 - mrna FBtr0307347 coding_transcript
14504197 14505517 20549 22931 - mrna FBtr0086713 coding_transcript
14504197 14505517 20549 22931 - mrna FBtr0307348 coding_transcript
14504197 14505517 20549 22931 - mrna FBtr0307349 coding_transcript
14504197 14504627 20549 22041 - exon coding_transcript
14504197 14504627 20549 22041 - exon coding_transcript
14504197 14504627 20549 22041 - exon coding_transcript
14504197 14504627 20549 22041 - exon coding_transcript
14504197 14504448 20549 20800 - three_prime_utr coding_transcript
14504197 14504448 20549 20800 - three_prime_utr coding_transcript
14504197 14504448 20549 20800 - three_prime_utr coding_transcript
14504197 14504448 20549 20800 - three_prime_utr coding_transcript
14504449 14504627 20801 22041 - cds coding_transcript
14504449 14504627 20801 22041 - cds coding_transcript
14504449 14504627 20801 22041 - cds coding_transcript
14504449 14504627 20801 22041 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 20877 20910 - misc_recomb FRT CLC
2358 2429 20918 20989 - cds BLRP CLC
2337 2357 20990 21010 - cds TEV CLC
2313 2336 21011 21034 - cds Precision cut site CLC
2271 2312 21035 21076 - cds V5 CLC
1548 2264 21083 21799 - cds SGFP CLC
1482 1541 21806 21865 - cds 2xTY1 CLC
dmel-5.43-2R
14504628 14504704 22042 22118 - intron coding_transcript
14504628 14504704 22042 22118 - intron coding_transcript
14504628 14504704 22042 22118 - intron coding_transcript
14504628 14504704 22042 22118 - intron coding_transcript
14504660 14504715 22074 22129 + intron coding_transcript
14504705 14505263 22119 22677 - exon coding_transcript
14504705 14505263 22119 22677 - exon coding_transcript
14504705 14505263 22119 22677 - exon coding_transcript
14504705 14505263 22119 22677 - exon coding_transcript
14504705 14505242 22119 22656 - cds coding_transcript
14504705 14505242 22119 22656 - cds coding_transcript
14504705 14505242 22119 22656 - cds coding_transcript
14504705 14505242 22119 22656 - cds coding_transcript
14504716 14505823 22130 23237 + exon coding_transcript
14504716 14505823 22130 23237 + three_prime_utr coding_transcript
14505243 14505263 22657 22677 - five_prime_utr coding_transcript
14505243 14505263 22657 22677 - five_prime_utr coding_transcript
14505243 14505263 22657 22677 - five_prime_utr coding_transcript
14505243 14505263 22657 22677 - five_prime_utr coding_transcript
14505264 14506662 22678 24076 - intron coding_transcript
14505264 14505482 22678 22896 - intron coding_transcript
14505264 14505383 22678 22797 - intron coding_transcript
14505264 14505336 22678 22750 - intron coding_transcript
14505337 14505517 22751 22931 - exon coding_transcript
14505337 14505517 22751 22931 - five_prime_utr coding_transcript
14505384 14505517 22798 22931 - exon coding_transcript
14505384 14505517 22798 22931 - five_prime_utr coding_transcript
14505483 14505517 22897 22931 - exon coding_transcript
14505483 14505517 22897 22931 - five_prime_utr coding_transcript
14506663 14506832 24077 24246 - exon coding_transcript
14506663 14506832 24077 24246 - five_prime_utr coding_transcript
14507961 14512553 25375 29967 - gene Atg7 coding_transcript
14509050 14510475 26464 27889 + gene CG5335 coding_transcript
14512772 14515249 30186 32663 + gene sec6 coding_transcript
14515399 14516784 32813 34198 + gene Eip55E coding_transcript
14517420 14519403 34834 36817 - gene CG5482 coding_transcript
14519833 14526773 37247 44187 - gene CG30122 coding_transcript
14527699 14528307 45113 45721 + gene CheA56a coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5493[20803]::S000169_fly_pretag_rev
TATTATGCAACAATACGAGAGGCTATATTTTTAGGATCTTGATGGATCTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG5493[20803]::S000169_fly_pretag_fwd
AGGTCACCTTCTGGAGCAAATACGGCGTGAGGACGAAGCAGAACGAGCAGgaagtgcataccaatcaggacccgc
fasta Fasta