Clone: 10123066965770744 C03
Tagged gene: CG5493
Identifier: FBgn0034364
Clone | FlyFos016960(pRedFlp-Hgr)(CG5493[20803]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
14499150 | 14500235 | 15502 | 16587 | - | gene | CG42697 | coding_transcript | |
14500587 | 14501759 | 16939 | 18111 | + | gene | CG10927 | coding_transcript | |
14501715 | 14502521 | 18067 | 18873 | - | gene | mRpS28 | coding_transcript | |
14502587 | 14503504 | 18939 | 19856 | + | gene | CG5323 | coding_transcript | |
14503493 | 14505823 | 19845 | 23237 | + | gene | CG5327 | coding_transcript | |
14504197 | 14506832 | 20549 | 24246 | - | gene | CG5493 | coding_transcript | |
14504197 | 14506832 | 20549 | 24246 | - | mrna | FBtr0307347 | coding_transcript | |
14504197 | 14505517 | 20549 | 22931 | - | mrna | FBtr0086713 | coding_transcript | |
14504197 | 14505517 | 20549 | 22931 | - | mrna | FBtr0307348 | coding_transcript | |
14504197 | 14505517 | 20549 | 22931 | - | mrna | FBtr0307349 | coding_transcript | |
14504197 | 14504627 | 20549 | 22041 | - | exon | coding_transcript | ||
14504197 | 14504627 | 20549 | 22041 | - | exon | coding_transcript | ||
14504197 | 14504627 | 20549 | 22041 | - | exon | coding_transcript | ||
14504197 | 14504627 | 20549 | 22041 | - | exon | coding_transcript | ||
14504197 | 14504448 | 20549 | 20800 | - | three_prime_utr | coding_transcript | ||
14504197 | 14504448 | 20549 | 20800 | - | three_prime_utr | coding_transcript | ||
14504197 | 14504448 | 20549 | 20800 | - | three_prime_utr | coding_transcript | ||
14504197 | 14504448 | 20549 | 20800 | - | three_prime_utr | coding_transcript | ||
14504449 | 14504627 | 20801 | 22041 | - | cds | coding_transcript | ||
14504449 | 14504627 | 20801 | 22041 | - | cds | coding_transcript | ||
14504449 | 14504627 | 20801 | 22041 | - | cds | coding_transcript | ||
14504449 | 14504627 | 20801 | 22041 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 20877 | 20910 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 20918 | 20989 | - | cds | BLRP | CLC | |
2337 | 2357 | 20990 | 21010 | - | cds | TEV | CLC | |
2313 | 2336 | 21011 | 21034 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 21035 | 21076 | - | cds | V5 | CLC | |
1548 | 2264 | 21083 | 21799 | - | cds | SGFP | CLC | |
1482 | 1541 | 21806 | 21865 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
14504628 | 14504704 | 22042 | 22118 | - | intron | coding_transcript | ||
14504628 | 14504704 | 22042 | 22118 | - | intron | coding_transcript | ||
14504628 | 14504704 | 22042 | 22118 | - | intron | coding_transcript | ||
14504628 | 14504704 | 22042 | 22118 | - | intron | coding_transcript | ||
14504660 | 14504715 | 22074 | 22129 | + | intron | coding_transcript | ||
14504705 | 14505263 | 22119 | 22677 | - | exon | coding_transcript | ||
14504705 | 14505263 | 22119 | 22677 | - | exon | coding_transcript | ||
14504705 | 14505263 | 22119 | 22677 | - | exon | coding_transcript | ||
14504705 | 14505263 | 22119 | 22677 | - | exon | coding_transcript | ||
14504705 | 14505242 | 22119 | 22656 | - | cds | coding_transcript | ||
14504705 | 14505242 | 22119 | 22656 | - | cds | coding_transcript | ||
14504705 | 14505242 | 22119 | 22656 | - | cds | coding_transcript | ||
14504705 | 14505242 | 22119 | 22656 | - | cds | coding_transcript | ||
14504716 | 14505823 | 22130 | 23237 | + | exon | coding_transcript | ||
14504716 | 14505823 | 22130 | 23237 | + | three_prime_utr | coding_transcript | ||
14505243 | 14505263 | 22657 | 22677 | - | five_prime_utr | coding_transcript | ||
14505243 | 14505263 | 22657 | 22677 | - | five_prime_utr | coding_transcript | ||
14505243 | 14505263 | 22657 | 22677 | - | five_prime_utr | coding_transcript | ||
14505243 | 14505263 | 22657 | 22677 | - | five_prime_utr | coding_transcript | ||
14505264 | 14506662 | 22678 | 24076 | - | intron | coding_transcript | ||
14505264 | 14505482 | 22678 | 22896 | - | intron | coding_transcript | ||
14505264 | 14505383 | 22678 | 22797 | - | intron | coding_transcript | ||
14505264 | 14505336 | 22678 | 22750 | - | intron | coding_transcript | ||
14505337 | 14505517 | 22751 | 22931 | - | exon | coding_transcript | ||
14505337 | 14505517 | 22751 | 22931 | - | five_prime_utr | coding_transcript | ||
14505384 | 14505517 | 22798 | 22931 | - | exon | coding_transcript | ||
14505384 | 14505517 | 22798 | 22931 | - | five_prime_utr | coding_transcript | ||
14505483 | 14505517 | 22897 | 22931 | - | exon | coding_transcript | ||
14505483 | 14505517 | 22897 | 22931 | - | five_prime_utr | coding_transcript | ||
14506663 | 14506832 | 24077 | 24246 | - | exon | coding_transcript | ||
14506663 | 14506832 | 24077 | 24246 | - | five_prime_utr | coding_transcript | ||
14507961 | 14512553 | 25375 | 29967 | - | gene | Atg7 | coding_transcript | |
14509050 | 14510475 | 26464 | 27889 | + | gene | CG5335 | coding_transcript | |
14512772 | 14515249 | 30186 | 32663 | + | gene | sec6 | coding_transcript | |
14515399 | 14516784 | 32813 | 34198 | + | gene | Eip55E | coding_transcript | |
14517420 | 14519403 | 34834 | 36817 | - | gene | CG5482 | coding_transcript | |
14519833 | 14526773 | 37247 | 44187 | - | gene | CG30122 | coding_transcript | |
14527699 | 14528307 | 45113 | 45721 | + | gene | CheA56a | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG5493[20803]::S000169_fly_pretag_rev
TATTATGCAACAATACGAGAGGCTATATTTTTAGGATCTTGATGGATCTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG5493[20803]::S000169_fly_pretag_fwd
AGGTCACCTTCTGGAGCAAATACGGCGTGAGGACGAAGCAGAACGAGCAGgaagtgcataccaatcaggacccgc
|
Fasta |