Clone: 10123066965770744 A03
Tagged gene: Nup44A
Identifier: FBgn0033247
Clone | FlyFos016954(pRedFlp-Hgr)(Nup44A[18269]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
3882941 | 3886078 | 10928 | 14065 | + | gene | Hey | coding_transcript | |
3881295 | 3882473 | 14533 | 15711 | + | gene | Dic3 | coding_transcript | |
3875967 | 3878789 | 18217 | 22101 | - | gene | Nup44A | coding_transcript | |
3875967 | 3878789 | 18217 | 22101 | - | mrna | FBtr0088860 | coding_transcript | |
3876037 | 3878789 | 18217 | 22031 | - | mrna | FBtr0088861 | coding_transcript | |
3876172 | 3878789 | 18217 | 21896 | - | mrna | FBtr0088862 | coding_transcript | |
3878433 | 3878789 | 18217 | 19635 | - | exon | coding_transcript | ||
3878433 | 3878789 | 18217 | 19635 | - | exon | coding_transcript | ||
3878433 | 3878789 | 18217 | 19635 | - | exon | coding_transcript | ||
3878740 | 3878789 | 18217 | 18266 | - | three_prime_utr | coding_transcript | ||
3878740 | 3878789 | 18217 | 18266 | - | three_prime_utr | coding_transcript | ||
3878740 | 3878789 | 18217 | 18266 | - | three_prime_utr | coding_transcript | ||
3878433 | 3878739 | 18267 | 19635 | - | cds | coding_transcript | ||
3878433 | 3878739 | 18267 | 19635 | - | cds | coding_transcript | ||
3878433 | 3878739 | 18267 | 19635 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 18343 | 18376 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 18384 | 18455 | - | cds | BLRP | CLC | |
2337 | 2357 | 18456 | 18476 | - | cds | TEV | CLC | |
2313 | 2336 | 18477 | 18500 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 18501 | 18542 | - | cds | V5 | CLC | |
1548 | 2264 | 18549 | 19265 | - | cds | SGFP | CLC | |
1482 | 1541 | 19272 | 19331 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
3878373 | 3878432 | 19636 | 19695 | - | intron | coding_transcript | ||
3878373 | 3878432 | 19636 | 19695 | - | intron | coding_transcript | ||
3878373 | 3878432 | 19636 | 19695 | - | intron | coding_transcript | ||
3878164 | 3878372 | 19696 | 19904 | - | exon | coding_transcript | ||
3878164 | 3878372 | 19696 | 19904 | - | cds | coding_transcript | ||
3878164 | 3878372 | 19696 | 19904 | - | exon | coding_transcript | ||
3878164 | 3878372 | 19696 | 19904 | - | cds | coding_transcript | ||
3878164 | 3878372 | 19696 | 19904 | - | exon | coding_transcript | ||
3878164 | 3878372 | 19696 | 19904 | - | cds | coding_transcript | ||
3878068 | 3878163 | 19905 | 20000 | - | intron | coding_transcript | ||
3878068 | 3878163 | 19905 | 20000 | - | intron | coding_transcript | ||
3878068 | 3878163 | 19905 | 20000 | - | intron | coding_transcript | ||
3877630 | 3878067 | 20001 | 20438 | - | exon | coding_transcript | ||
3877630 | 3878067 | 20001 | 20438 | - | cds | coding_transcript | ||
3877630 | 3878067 | 20001 | 20438 | - | exon | coding_transcript | ||
3877630 | 3878067 | 20001 | 20438 | - | cds | coding_transcript | ||
3877630 | 3878067 | 20001 | 20438 | - | exon | coding_transcript | ||
3877630 | 3878067 | 20001 | 20438 | - | cds | coding_transcript | ||
3877569 | 3877629 | 20439 | 20499 | - | intron | coding_transcript | ||
3877569 | 3877629 | 20439 | 20499 | - | intron | coding_transcript | ||
3877569 | 3877629 | 20439 | 20499 | - | intron | coding_transcript | ||
3876172 | 3877568 | 20500 | 21896 | - | exon | coding_transcript | ||
3877337 | 3877568 | 20500 | 20731 | - | exon | coding_transcript | ||
3877337 | 3877568 | 20500 | 20731 | - | exon | coding_transcript | ||
3877458 | 3877568 | 20500 | 20610 | - | cds | coding_transcript | ||
3877458 | 3877568 | 20500 | 20610 | - | cds | coding_transcript | ||
3877458 | 3877568 | 20500 | 20610 | - | cds | coding_transcript | ||
3876172 | 3877457 | 20611 | 21896 | - | five_prime_utr | coding_transcript | ||
3877337 | 3877457 | 20611 | 20731 | - | five_prime_utr | coding_transcript | ||
3877337 | 3877457 | 20611 | 20731 | - | five_prime_utr | coding_transcript | ||
3876015 | 3877336 | 20732 | 22053 | - | intron | coding_transcript | ||
3876133 | 3877336 | 20732 | 21935 | - | intron | coding_transcript | ||
3876037 | 3876132 | 21936 | 22031 | - | exon | coding_transcript | ||
3876037 | 3876132 | 21936 | 22031 | - | five_prime_utr | coding_transcript | ||
3875967 | 3876014 | 22054 | 22101 | - | exon | coding_transcript | ||
3875967 | 3876014 | 22054 | 22101 | - | five_prime_utr | coding_transcript | ||
3861620 | 3874729 | 23339 | 36448 | + | gene | ACC | coding_transcript | |
3859680 | 3861604 | 36464 | 38388 | - | gene | CSN4 | coding_transcript | |
3855634 | 3859554 | 38514 | 42434 | + | gene | CG8726 | coding_transcript | |
3854283 | 3855529 | 42539 | 43785 | + | gene | CG14763 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
Nup44A[18269]::S000169_fly_pretag_fwd
CGGCCAAGTTCTACAAAAAGGGCACCATCGGCAACCAGGTGCCGTGGCACgaagtgcataccaatcaggacccgc
|
Fasta |
Nup44A[18269]::S000169_fly_pretag_rev
GGTTTAACTTAGGAATTTATTCGGAACTCTTACAATTAAGAACAAGATCActtgtcgtcgtcatccttgtagtca
|
Fasta |