Clone: 10123066965770744 H01
Tagged gene: Scgdelta
Identifier: FBgn0025391
Clone | FlyFos016949(pRedFlp-Hgr)(Scgdelta[35255]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-X | ||||||||
1639909 | 1648096 | 27586 | 36835 | + | gene | Scgdelta | coding_transcript | |
1639911 | 1648096 | 27586 | 36833 | + | mrna | FBtr0302174 | coding_transcript | |
1647755 | 1648096 | 27586 | 27927 | + | exon | coding_transcript | ||
1647755 | 1648096 | 27586 | 27927 | + | five_prime_utr | coding_transcript | ||
1639911 | 1648072 | 27610 | 36833 | + | mrna | FBtr0070277 | coding_transcript | |
1647749 | 1648072 | 27610 | 27933 | + | exon | coding_transcript | ||
1647749 | 1648072 | 27610 | 27933 | + | five_prime_utr | coding_transcript | ||
1644518 | 1647754 | 27928 | 31164 | + | intron | coding_transcript | ||
1644518 | 1647748 | 27934 | 31164 | + | intron | coding_transcript | ||
1639909 | 1645054 | 30628 | 36835 | + | mrna | FBtr0302175 | coding_transcript | |
1639911 | 1645054 | 30628 | 36833 | + | mrna | FBtr0302028 | coding_transcript | |
1643928 | 1645054 | 30628 | 31754 | + | exon | coding_transcript | ||
1643946 | 1645054 | 30628 | 31736 | + | exon | coding_transcript | ||
1644447 | 1645054 | 30628 | 31235 | + | five_prime_utr | coding_transcript | ||
1644447 | 1645054 | 30628 | 31235 | + | five_prime_utr | coding_transcript | ||
1643928 | 1644517 | 31165 | 31754 | + | exon | coding_transcript | ||
1643928 | 1644517 | 31165 | 31754 | + | exon | coding_transcript | ||
1644447 | 1644517 | 31165 | 31235 | + | five_prime_utr | coding_transcript | ||
1644447 | 1644517 | 31165 | 31235 | + | five_prime_utr | coding_transcript | ||
1643928 | 1644446 | 31236 | 31754 | + | cds | coding_transcript | ||
1643928 | 1644446 | 31236 | 31754 | + | cds | coding_transcript | ||
1643928 | 1644446 | 31236 | 31754 | + | cds | coding_transcript | ||
1643946 | 1644446 | 31236 | 31736 | + | cds | coding_transcript | ||
1643851 | 1643945 | 31737 | 31831 | + | intron | coding_transcript | ||
1643851 | 1643927 | 31755 | 31831 | + | intron | coding_transcript | ||
1643851 | 1643927 | 31755 | 31831 | + | intron | coding_transcript | ||
1643851 | 1643927 | 31755 | 31831 | + | intron | coding_transcript | ||
1643730 | 1643850 | 31832 | 31952 | + | exon | coding_transcript | ||
1643730 | 1643850 | 31832 | 31952 | + | cds | coding_transcript | ||
1643730 | 1643850 | 31832 | 31952 | + | exon | coding_transcript | ||
1643730 | 1643850 | 31832 | 31952 | + | cds | coding_transcript | ||
1643730 | 1643850 | 31832 | 31952 | + | exon | coding_transcript | ||
1643730 | 1643850 | 31832 | 31952 | + | cds | coding_transcript | ||
1643730 | 1643850 | 31832 | 31952 | + | exon | coding_transcript | ||
1643730 | 1643850 | 31832 | 31952 | + | cds | coding_transcript | ||
1642327 | 1643729 | 31953 | 33355 | + | intron | coding_transcript | ||
1642327 | 1643729 | 31953 | 33355 | + | intron | coding_transcript | ||
1642327 | 1643729 | 31953 | 33355 | + | intron | coding_transcript | ||
1642327 | 1643729 | 31953 | 33355 | + | intron | coding_transcript | ||
1642065 | 1642326 | 33356 | 33617 | + | exon | coding_transcript | ||
1642065 | 1642326 | 33356 | 33617 | + | cds | coding_transcript | ||
1642065 | 1642326 | 33356 | 33617 | + | exon | coding_transcript | ||
1642065 | 1642326 | 33356 | 33617 | + | cds | coding_transcript | ||
1642065 | 1642326 | 33356 | 33617 | + | exon | coding_transcript | ||
1642065 | 1642326 | 33356 | 33617 | + | cds | coding_transcript | ||
1642065 | 1642326 | 33356 | 33617 | + | exon | coding_transcript | ||
1642065 | 1642326 | 33356 | 33617 | + | cds | coding_transcript | ||
1640844 | 1642064 | 33618 | 34838 | + | intron | coding_transcript | ||
1640844 | 1642064 | 33618 | 34838 | + | intron | coding_transcript | ||
1640844 | 1642064 | 33618 | 34838 | + | intron | coding_transcript | ||
1640844 | 1642064 | 33618 | 34838 | + | intron | coding_transcript | ||
1640720 | 1640843 | 34839 | 34962 | + | exon | coding_transcript | ||
1640720 | 1640843 | 34839 | 34962 | + | cds | coding_transcript | ||
1640720 | 1640843 | 34839 | 34962 | + | exon | coding_transcript | ||
1640720 | 1640843 | 34839 | 34962 | + | cds | coding_transcript | ||
1640720 | 1640843 | 34839 | 34962 | + | exon | coding_transcript | ||
1640720 | 1640843 | 34839 | 34962 | + | cds | coding_transcript | ||
1640720 | 1640843 | 34839 | 34962 | + | exon | coding_transcript | ||
1640720 | 1640843 | 34839 | 34962 | + | cds | coding_transcript | ||
1640613 | 1640719 | 34963 | 35069 | + | intron | coding_transcript | ||
1640613 | 1640719 | 34963 | 35069 | + | intron | coding_transcript | ||
1640613 | 1640719 | 34963 | 35069 | + | intron | coding_transcript | ||
1640613 | 1640719 | 34963 | 35069 | + | intron | coding_transcript | ||
1639909 | 1640612 | 35070 | 36835 | + | exon | coding_transcript | ||
1639911 | 1640612 | 35070 | 36833 | + | exon | coding_transcript | ||
1639911 | 1640612 | 35070 | 36833 | + | exon | coding_transcript | ||
1639911 | 1640612 | 35070 | 36833 | + | exon | coding_transcript | ||
1640424 | 1640612 | 35070 | 36320 | + | cds | coding_transcript | ||
1640424 | 1640612 | 35070 | 36320 | + | cds | coding_transcript | ||
1640424 | 1640612 | 35070 | 36320 | + | cds | coding_transcript | ||
1640424 | 1640612 | 35070 | 36320 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 35256 | 35315 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 35322 | 36038 | + | cds | SGFP | CLC | |
2271 | 2312 | 36045 | 36086 | + | cds | V5 | CLC | |
2313 | 2336 | 36087 | 36110 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 36111 | 36131 | + | cds | TEV | CLC | |
2358 | 2429 | 36132 | 36203 | + | cds | BLRP | CLC | |
3813 | 3846 | 36211 | 36244 | + | misc_recomb | FRT | CLC | |
dmel-5.43-X | ||||||||
1639909 | 1640423 | 36321 | 36835 | + | three_prime_utr | coding_transcript | ||
1639911 | 1640423 | 36321 | 36833 | + | three_prime_utr | coding_transcript | ||
1639911 | 1640423 | 36321 | 36833 | + | three_prime_utr | coding_transcript | ||
1639911 | 1640423 | 36321 | 36833 | + | three_prime_utr | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
Scgdelta[35255]::S000169_fly_pretag_fwd
TCGCTGCACCCCACTCCATATGTGCCGGCGATGATTCCACGGTCTGCAGAgaagtgcataccaatcaggacccgc
|
Fasta |
Scgdelta[35255]::S000169_fly_pretag_rev
GATGTGGACGATGTAGATGTTGACTGCCAGCGCGCCGAATCGTGCAATCActtgtcgtcgtcatccttgtagtca
|
Fasta |