Clone: 05512796956240418 F12
Tagged gene: RpL34a
Identifier: FBgn0039406
Clone | FlyFos016935(pRedFlp-Hgr)(RpL34a[18233]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
21878547 | 21879850 | 12562 | 13865 | + | gene | vps2 | coding_transcript | |
21879959 | 21881210 | 13974 | 15225 | - | gene | Dak1 | coding_transcript | |
21881368 | 21882213 | 15383 | 16228 | - | gene | Sld5 | coding_transcript | |
21882349 | 21883072 | 16364 | 17087 | + | gene | CG14543 | coding_transcript | |
21883069 | 21883945 | 17084 | 17960 | - | gene | CG42498 | coding_transcript | |
21883069 | 21883945 | 17084 | 17960 | - | gene | CG14550 | coding_transcript | |
21884142 | 21884989 | 18157 | 20066 | - | gene | RpL34a | coding_transcript | |
21884142 | 21884989 | 18157 | 20066 | - | mrna | FBtr0084972 | coding_transcript | |
21884142 | 21884989 | 18157 | 20066 | - | mrna | FBtr0084973 | coding_transcript | |
21884142 | 21884989 | 18157 | 20066 | - | mrna | FBtr0302369 | coding_transcript | |
21884142 | 21884639 | 18157 | 19716 | - | exon | coding_transcript | ||
21884142 | 21884639 | 18157 | 19716 | - | exon | coding_transcript | ||
21884142 | 21884639 | 18157 | 19716 | - | exon | coding_transcript | ||
21884142 | 21884215 | 18157 | 18230 | - | three_prime_utr | coding_transcript | ||
21884142 | 21884215 | 18157 | 18230 | - | three_prime_utr | coding_transcript | ||
21884142 | 21884215 | 18157 | 18230 | - | three_prime_utr | coding_transcript | ||
21884216 | 21884639 | 18231 | 19716 | - | cds | coding_transcript | ||
21884216 | 21884639 | 18231 | 19716 | - | cds | coding_transcript | ||
21884216 | 21884639 | 18231 | 19716 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 18307 | 18340 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 18348 | 18419 | - | cds | BLRP | CLC | |
2337 | 2357 | 18420 | 18440 | - | cds | TEV | CLC | |
2313 | 2336 | 18441 | 18464 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 18465 | 18506 | - | cds | V5 | CLC | |
1548 | 2264 | 18513 | 19229 | - | cds | SGFP | CLC | |
1482 | 1541 | 19236 | 19295 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3R | ||||||||
21884640 | 21884701 | 19717 | 19778 | - | intron | coding_transcript | ||
21884640 | 21884701 | 19717 | 19778 | - | intron | coding_transcript | ||
21884640 | 21884701 | 19717 | 19778 | - | intron | coding_transcript | ||
21884702 | 21884776 | 19779 | 19853 | - | exon | coding_transcript | ||
21884702 | 21884776 | 19779 | 19853 | - | exon | coding_transcript | ||
21884702 | 21884773 | 19779 | 19850 | - | exon | coding_transcript | ||
21884702 | 21884766 | 19779 | 19843 | - | cds | coding_transcript | ||
21884702 | 21884766 | 19779 | 19843 | - | cds | coding_transcript | ||
21884702 | 21884766 | 19779 | 19843 | - | cds | coding_transcript | ||
21884767 | 21884776 | 19844 | 19853 | - | five_prime_utr | coding_transcript | ||
21884767 | 21884776 | 19844 | 19853 | - | five_prime_utr | coding_transcript | ||
21884767 | 21884773 | 19844 | 19850 | - | five_prime_utr | coding_transcript | ||
21884774 | 21884956 | 19851 | 20033 | - | intron | coding_transcript | ||
21884777 | 21884956 | 19854 | 20033 | - | intron | coding_transcript | ||
21884777 | 21884941 | 19854 | 20018 | - | intron | coding_transcript | ||
21884942 | 21884989 | 20019 | 20066 | - | exon | coding_transcript | ||
21884942 | 21884989 | 20019 | 20066 | - | five_prime_utr | coding_transcript | ||
21884957 | 21884989 | 20034 | 20066 | - | exon | coding_transcript | ||
21884957 | 21884989 | 20034 | 20066 | - | five_prime_utr | coding_transcript | ||
21884957 | 21884989 | 20034 | 20066 | - | exon | coding_transcript | ||
21884957 | 21884989 | 20034 | 20066 | - | five_prime_utr | coding_transcript | ||
21885218 | 21887015 | 20295 | 22092 | + | gene | CG14544 | coding_transcript | |
21886990 | 21888733 | 22067 | 23810 | - | gene | CG14551 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
RpL34a[18233]::S000169_fly_pretag_fwd
AGAAGCCCGCTCCCAAGGGCGCTCCTAAAGGAGTCGTCAAGTCCAAGAAGgaagtgcataccaatcaggacccgc
|
Fasta |
RpL34a[18233]::S000169_fly_pretag_rev
AAAGGTGTTCAATATCATTGCTCCAAACAAATCCTTCTGGTAAATGGTTActtgtcgtcgtcatccttgtagtca
|
Fasta |