Clone: 05512796956240418 F11

Tagged gene: CG5805
Identifier: FBgn0039223

Clone FlyFos016930(pRedFlp-Hgr)(CG5805[21612]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
20610459 20613152 20951 24706 - gene CG5805 coding_transcript
20610459 20613152 20951 24706 - mrna FBtr0084743 coding_transcript
20610459 20611309 20951 22863 - exon coding_transcript
20610459 20611117 20951 21609 - three_prime_utr coding_transcript
20611118 20611309 21610 22863 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 21686 21719 - misc_recomb FRT CLC
2358 2429 21727 21798 - cds BLRP CLC
2337 2357 21799 21819 - cds TEV CLC
2313 2336 21820 21843 - cds Precision cut site CLC
2271 2312 21844 21885 - cds V5 CLC
1548 2264 21892 22608 - cds SGFP CLC
1482 1541 22615 22674 - cds 2xTY1 CLC
dmel-5.43-3R
20611310 20611508 22864 23062 - intron coding_transcript
20611509 20611636 23063 23190 - exon coding_transcript
20611509 20611636 23063 23190 - cds coding_transcript
20611637 20611694 23191 23248 - intron coding_transcript
20611695 20612624 23249 24178 - exon coding_transcript
20611695 20612394 23249 23948 - cds coding_transcript
20612395 20612624 23949 24178 - five_prime_utr coding_transcript
20612625 20613016 24179 24570 - intron coding_transcript
20613017 20613152 24571 24706 - exon coding_transcript
20613017 20613152 24571 24706 - five_prime_utr coding_transcript
20614072 20615858 25626 27412 - gene CG13634 coding_transcript
20617465 20623678 29019 35232 + gene Ets96B coding_transcript
20623179 20625390 34733 36944 - gene Ude coding_transcript
20625691 20630977 37245 42531 - gene polybromo coding_transcript
20633333 20634403 44887 45957 + gene CG6980 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG5805[21612]::S000169_fly_pretag_rev
AATGCAGTTTTGAGTTGGTTTCCGTTTGGCTGGGGATTGTGCGTTCTTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG5805[21612]::S000169_fly_pretag_fwd
CGATCAAGCGCATTGCGGTGGACGAGCAGTACAAGCATCAGATCCGCTGGgaagtgcataccaatcaggacccgc
fasta Fasta