Clone: 05512796956240418 C11

Tagged gene: CG6980
Identifier: FBgn0039228

Clone FlyFos016930(pRedFlp-Hgr)(CG6980[44779]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
20610459 20613152 20951 23644 - gene CG5805 coding_transcript
20614072 20615858 24564 26350 - gene CG13634 coding_transcript
20617465 20623678 27957 34170 + gene Ets96B coding_transcript
20623179 20625390 33671 35882 - gene Ude coding_transcript
20625691 20630977 36183 41469 - gene polybromo coding_transcript
20633333 20634403 43825 45957 + gene CG6980 coding_transcript
20633333 20634403 43825 45957 + mrna FBtr0084698 coding_transcript
20633333 20633805 43825 44297 + exon coding_transcript
20633333 20633407 43825 43899 + five_prime_utr coding_transcript
20633408 20633805 43900 44297 + cds coding_transcript
20633806 20633863 44298 44355 + intron coding_transcript
20633864 20633986 44356 44478 + exon coding_transcript
20633864 20633986 44356 44478 + cds coding_transcript
20633987 20634058 44479 44550 + intron coding_transcript
20634059 20634403 44551 45957 + exon coding_transcript
20634059 20634290 44551 45844 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 44780 44839 + cds 2xTY1 CLC
1548 2264 44846 45562 + cds SGFP CLC
2271 2312 45569 45610 + cds V5 CLC
2313 2336 45611 45634 + cds Precision cut site CLC
2337 2357 45635 45655 + cds TEV CLC
2358 2429 45656 45727 + cds BLRP CLC
3813 3846 45735 45768 + misc_recomb FRT CLC
dmel-5.43-3R
20634291 20634403 45845 45957 + three_prime_utr coding_transcript
20634319 20634387 45873 45941 - exon coding_transcript
20634319 20634387 45873 45941 - cds coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
CG6980[44779]::S000169_fly_pretag_rev
GGTGTCATGCTTATGCTGAGTGAGTATATAATGCAAAATTAAATAAGTTActtgtcgtcgtcatccttgtagtca
fasta Fasta
CG6980[44779]::S000169_fly_pretag_fwd
TTGACAAGTACATTAAGCAACTGGAAGCCGATCTTAAAGCACTAGAAATAgaagtgcataccaatcaggacccgc
fasta Fasta