Clone: 05512796956240418 C10

Tagged gene: Vha16-5
Identifier: FBgn0032294

Clone FlyFos016926(pRedFlp-Hgr)(Vha16-5[47289]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
10699408 10701458 10319 12369 - gene Lip1 coding_transcript
10702235 10706190 13146 17101 - gene Lip2 coding_transcript
10703621 10704935 14532 15846 + gene CG6415 coding_transcript
10724274 10728740 35185 39651 + gene CG6431 coding_transcript
10728975 10730302 39886 41213 + gene CG6443 coding_transcript
10730255 10731356 41166 42267 + gene CG17118 coding_transcript
10731400 10732406 42311 43317 - gene CG6750 coding_transcript
10732749 10733307 43660 44218 + gene Dpy-30L1 coding_transcript
10733293 10736077 44204 46988 - gene Nup107 coding_transcript
10736319 10737576 47230 49549 - gene Vha16-5 coding_transcript
10736319 10737576 47230 49549 - mrna FBtr0080120 coding_transcript
10736319 10737043 47230 49016 - exon coding_transcript
10736319 10736375 47230 47286 - three_prime_utr coding_transcript
10736376 10736957 47287 48930 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 47363 47396 - misc_recomb FRT CLC
2358 2429 47404 47475 - cds BLRP CLC
2337 2357 47476 47496 - cds TEV CLC
2313 2336 47497 47520 - cds Precision cut site CLC
2271 2312 47521 47562 - cds V5 CLC
1548 2264 47569 48285 - cds SGFP CLC
1482 1541 48292 48351 - cds 2xTY1 CLC
dmel-5.43-2L
10736958 10737043 48931 49016 - five_prime_utr coding_transcript
10737044 10737236 49017 49209 - intron coding_transcript
10737237 10737576 49210 49549 - exon coding_transcript
10737237 10737576 49210 49549 - five_prime_utr coding_transcript
10737345 10740762 49318 52735 + gene CG12299 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
Vha16-5[47289]::S000169_fly_pretag_rev
AAAAACGTTTCTTAACGAATTAAATATTTTAGATATAACAAATTCTGCTActtgtcgtcgtcatccttgtagtca
fasta Fasta
Vha16-5[47289]::S000169_fly_pretag_fwd
GTCTCTACGGCCTGATCATTGGGATTTATTTGTACACGGTCAACATTAAGgaagtgcataccaatcaggacccgc
fasta Fasta