Clone: 05512796956240418 H09
Tagged gene: PH4alphaSG2
Identifier: FBgn0039779
Clone | FlyFos016922(pRedFlp-Hgr)(PH4alphaSG2[16927]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
26312735 | 26313648 | 11989 | 12902 | - | gene | Jon99Fii | coding_transcript | |
26314687 | 26315625 | 13941 | 14879 | + | gene | Jon99Fi | coding_transcript | |
26315798 | 26317724 | 15052 | 18040 | + | gene | PH4alphaSG2 | coding_transcript | |
26315798 | 26317724 | 15052 | 18040 | + | mrna | FBtr0085653 | coding_transcript | |
26315798 | 26317724 | 15052 | 18040 | + | mrna | FBtr0085654 | coding_transcript | |
26315798 | 26316262 | 15052 | 15516 | + | exon | coding_transcript | ||
26315798 | 26316262 | 15052 | 15516 | + | five_prime_utr | coding_transcript | ||
26315798 | 26316046 | 15052 | 15300 | + | exon | coding_transcript | ||
26315798 | 26315861 | 15052 | 15115 | + | five_prime_utr | coding_transcript | ||
26315862 | 26316046 | 15116 | 15300 | + | cds | coding_transcript | ||
26316047 | 26316098 | 15301 | 15352 | + | intron | coding_transcript | ||
26316099 | 26316262 | 15353 | 15516 | + | exon | coding_transcript | ||
26316099 | 26316262 | 15353 | 15516 | + | cds | coding_transcript | ||
26316263 | 26316317 | 15517 | 15571 | + | intron | coding_transcript | ||
26316263 | 26316317 | 15517 | 15571 | + | intron | coding_transcript | ||
26316318 | 26317291 | 15572 | 16545 | + | exon | coding_transcript | ||
26316318 | 26317291 | 15572 | 16545 | + | cds | coding_transcript | ||
26316318 | 26317291 | 15572 | 16545 | + | exon | coding_transcript | ||
26316318 | 26316646 | 15572 | 15900 | + | five_prime_utr | coding_transcript | ||
26316647 | 26317291 | 15901 | 16545 | + | cds | coding_transcript | ||
26317292 | 26317347 | 16546 | 16601 | + | intron | coding_transcript | ||
26317292 | 26317347 | 16546 | 16601 | + | intron | coding_transcript | ||
26317348 | 26317513 | 16602 | 16767 | + | exon | coding_transcript | ||
26317348 | 26317513 | 16602 | 16767 | + | cds | coding_transcript | ||
26317348 | 26317513 | 16602 | 16767 | + | exon | coding_transcript | ||
26317348 | 26317513 | 16602 | 16767 | + | cds | coding_transcript | ||
26317514 | 26317581 | 16768 | 16835 | + | intron | coding_transcript | ||
26317514 | 26317581 | 16768 | 16835 | + | intron | coding_transcript | ||
26317535 | 26321875 | 16789 | 22191 | - | gene | PH4alphaMP | coding_transcript | |
26317582 | 26317724 | 16836 | 18040 | + | exon | coding_transcript | ||
26317582 | 26317724 | 16836 | 18040 | + | exon | coding_transcript | ||
26317582 | 26317676 | 16836 | 17992 | + | cds | coding_transcript | ||
26317582 | 26317676 | 16836 | 17992 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 16928 | 16987 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 16994 | 17710 | + | cds | SGFP | CLC | |
2271 | 2312 | 17717 | 17758 | + | cds | V5 | CLC | |
2313 | 2336 | 17759 | 17782 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 17783 | 17803 | + | cds | TEV | CLC | |
2358 | 2429 | 17804 | 17875 | + | cds | BLRP | CLC | |
3813 | 3846 | 17883 | 17916 | + | misc_recomb | FRT | CLC | |
dmel-5.43-3R | ||||||||
26317677 | 26317724 | 17993 | 18040 | + | three_prime_utr | coding_transcript | ||
26317677 | 26317724 | 17993 | 18040 | + | three_prime_utr | coding_transcript | ||
26322473 | 26326048 | 22789 | 26364 | - | gene | PH4alphaNE1 | coding_transcript | |
26326924 | 26329082 | 27240 | 29398 | - | gene | CG31371 | coding_transcript | |
26329387 | 26331371 | 29703 | 31687 | - | gene | PH4alphaSG1 | coding_transcript | |
26331709 | 26333699 | 32025 | 34015 | + | gene | CG15539 | coding_transcript | |
26333745 | 26335868 | 34061 | 36184 | + | gene | CG34041 | coding_transcript | |
26335805 | 26337936 | 36121 | 38252 | - | gene | PH4alphaNE2 | coding_transcript | |
26338044 | 26340077 | 38360 | 40393 | - | gene | CG31524 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
PH4alphaSG2[16927]::S000169_fly_pretag_fwd
GTCCCTGCAACCTCACCTCAGATAGCTACAAGTCGCTAGCCTATCGAGATgaagtgcataccaatcaggacccgc
|
Fasta |
PH4alphaSG2[16927]::S000169_fly_pretag_rev
TAAAATAAGATATTAATTTATTAAATGTTTATTATATTAAATTACACCTActtgtcgtcgtcatccttgtagtca
|
Fasta |