Clone: 05512796956240418 C09
Tagged gene: hig
Identifier: FBgn0010114
Clone | FlyFos016911(pRedFlp-Hgr)(hig[17871]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
5115286 | 5134752 | 17071 | 37599 | - | gene | hig | coding_transcript | |
5115286 | 5134752 | 17071 | 37599 | - | mrna | FBtr0088608 | coding_transcript | |
5115286 | 5134752 | 17071 | 37599 | - | mrna | FBtr0100119 | coding_transcript | |
5115286 | 5116781 | 17071 | 19628 | - | exon | coding_transcript | ||
5115286 | 5116781 | 17071 | 19628 | - | exon | coding_transcript | ||
5115286 | 5116590 | 17071 | 19437 | - | three_prime_utr | coding_transcript | ||
5115286 | 5116590 | 17071 | 19437 | - | three_prime_utr | coding_transcript | ||
5115288 | 5134752 | 17073 | 37599 | - | mrna | FBtr0088606 | coding_transcript | |
5115288 | 5134752 | 17073 | 37599 | - | mrna | FBtr0088607 | coding_transcript | |
5115288 | 5116292 | 17073 | 19139 | - | exon | coding_transcript | ||
5115288 | 5116292 | 17073 | 19139 | - | exon | coding_transcript | ||
5115288 | 5116083 | 17073 | 17868 | - | three_prime_utr | coding_transcript | ||
5115288 | 5116083 | 17073 | 17868 | - | three_prime_utr | coding_transcript | ||
5116084 | 5116292 | 17869 | 19139 | - | cds | coding_transcript | ||
5116084 | 5116292 | 17869 | 19139 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 17945 | 17978 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 17986 | 18057 | - | cds | BLRP | CLC | |
2337 | 2357 | 18058 | 18078 | - | cds | TEV | CLC | |
2313 | 2336 | 18079 | 18102 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 18103 | 18144 | - | cds | V5 | CLC | |
1548 | 2264 | 18151 | 18867 | - | cds | SGFP | CLC | |
1482 | 1541 | 18874 | 18933 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
5116293 | 5116598 | 19140 | 19445 | - | intron | coding_transcript | ||
5116293 | 5116598 | 19140 | 19445 | - | intron | coding_transcript | ||
5116591 | 5116781 | 19438 | 19628 | - | cds | coding_transcript | ||
5116591 | 5116781 | 19438 | 19628 | - | cds | coding_transcript | ||
5116599 | 5116781 | 19446 | 19628 | - | exon | coding_transcript | ||
5116599 | 5116781 | 19446 | 19628 | - | cds | coding_transcript | ||
5116599 | 5116781 | 19446 | 19628 | - | exon | coding_transcript | ||
5116599 | 5116781 | 19446 | 19628 | - | cds | coding_transcript | ||
5116782 | 5117102 | 19629 | 19949 | - | intron | coding_transcript | ||
5116782 | 5117102 | 19629 | 19949 | - | intron | coding_transcript | ||
5116782 | 5117102 | 19629 | 19949 | - | intron | coding_transcript | ||
5116782 | 5117102 | 19629 | 19949 | - | intron | coding_transcript | ||
5117103 | 5117591 | 19950 | 20438 | - | exon | coding_transcript | ||
5117103 | 5117591 | 19950 | 20438 | - | cds | coding_transcript | ||
5117103 | 5117591 | 19950 | 20438 | - | exon | coding_transcript | ||
5117103 | 5117591 | 19950 | 20438 | - | cds | coding_transcript | ||
5117103 | 5117591 | 19950 | 20438 | - | exon | coding_transcript | ||
5117103 | 5117591 | 19950 | 20438 | - | cds | coding_transcript | ||
5117103 | 5117591 | 19950 | 20438 | - | exon | coding_transcript | ||
5117103 | 5117591 | 19950 | 20438 | - | cds | coding_transcript | ||
5117592 | 5117816 | 20439 | 20663 | - | intron | coding_transcript | ||
5117592 | 5117816 | 20439 | 20663 | - | intron | coding_transcript | ||
5117592 | 5117816 | 20439 | 20663 | - | intron | coding_transcript | ||
5117592 | 5117816 | 20439 | 20663 | - | intron | coding_transcript | ||
5117817 | 5118153 | 20664 | 21000 | - | exon | coding_transcript | ||
5117817 | 5118153 | 20664 | 21000 | - | cds | coding_transcript | ||
5117817 | 5118153 | 20664 | 21000 | - | exon | coding_transcript | ||
5117817 | 5118153 | 20664 | 21000 | - | cds | coding_transcript | ||
5117817 | 5118153 | 20664 | 21000 | - | exon | coding_transcript | ||
5117817 | 5118153 | 20664 | 21000 | - | cds | coding_transcript | ||
5117817 | 5118153 | 20664 | 21000 | - | exon | coding_transcript | ||
5117817 | 5118153 | 20664 | 21000 | - | cds | coding_transcript | ||
5118154 | 5119252 | 21001 | 22099 | - | intron | coding_transcript | ||
5118154 | 5119252 | 21001 | 22099 | - | intron | coding_transcript | ||
5118154 | 5118610 | 21001 | 21457 | - | intron | coding_transcript | ||
5118154 | 5118610 | 21001 | 21457 | - | intron | coding_transcript | ||
5118611 | 5118685 | 21458 | 21532 | - | exon | coding_transcript | ||
5118611 | 5118685 | 21458 | 21532 | - | cds | coding_transcript | ||
5118611 | 5118685 | 21458 | 21532 | - | exon | coding_transcript | ||
5118611 | 5118685 | 21458 | 21532 | - | cds | coding_transcript | ||
5118686 | 5119252 | 21533 | 22099 | - | intron | coding_transcript | ||
5118686 | 5119252 | 21533 | 22099 | - | intron | coding_transcript | ||
5119253 | 5119350 | 22100 | 22197 | - | exon | coding_transcript | ||
5119253 | 5119350 | 22100 | 22197 | - | cds | coding_transcript | ||
5119253 | 5119350 | 22100 | 22197 | - | exon | coding_transcript | ||
5119253 | 5119350 | 22100 | 22197 | - | cds | coding_transcript | ||
5119253 | 5119350 | 22100 | 22197 | - | exon | coding_transcript | ||
5119253 | 5119350 | 22100 | 22197 | - | cds | coding_transcript | ||
5119253 | 5119350 | 22100 | 22197 | - | exon | coding_transcript | ||
5119253 | 5119350 | 22100 | 22197 | - | cds | coding_transcript | ||
5119351 | 5120012 | 22198 | 22859 | - | intron | coding_transcript | ||
5119351 | 5120012 | 22198 | 22859 | - | intron | coding_transcript | ||
5119351 | 5120012 | 22198 | 22859 | - | intron | coding_transcript | ||
5119351 | 5120012 | 22198 | 22859 | - | intron | coding_transcript | ||
5120013 | 5120237 | 22860 | 23084 | - | exon | coding_transcript | ||
5120013 | 5120237 | 22860 | 23084 | - | cds | coding_transcript | ||
5120013 | 5120237 | 22860 | 23084 | - | exon | coding_transcript | ||
5120013 | 5120237 | 22860 | 23084 | - | cds | coding_transcript | ||
5120013 | 5120237 | 22860 | 23084 | - | exon | coding_transcript | ||
5120013 | 5120237 | 22860 | 23084 | - | cds | coding_transcript | ||
5120013 | 5120237 | 22860 | 23084 | - | exon | coding_transcript | ||
5120013 | 5120237 | 22860 | 23084 | - | cds | coding_transcript | ||
5120238 | 5121949 | 23085 | 24796 | - | intron | coding_transcript | ||
5120238 | 5121949 | 23085 | 24796 | - | intron | coding_transcript | ||
5120238 | 5121949 | 23085 | 24796 | - | intron | coding_transcript | ||
5120238 | 5121949 | 23085 | 24796 | - | intron | coding_transcript | ||
5121950 | 5123080 | 24797 | 25927 | - | exon | coding_transcript | ||
5121950 | 5123080 | 24797 | 25927 | - | cds | coding_transcript | ||
5121950 | 5123080 | 24797 | 25927 | - | exon | coding_transcript | ||
5121950 | 5123080 | 24797 | 25927 | - | cds | coding_transcript | ||
5121950 | 5123080 | 24797 | 25927 | - | exon | coding_transcript | ||
5121950 | 5123080 | 24797 | 25927 | - | cds | coding_transcript | ||
5121950 | 5123080 | 24797 | 25927 | - | exon | coding_transcript | ||
5121950 | 5123080 | 24797 | 25927 | - | cds | coding_transcript | ||
5123081 | 5134269 | 25928 | 37116 | - | intron | coding_transcript | ||
5123081 | 5134269 | 25928 | 37116 | - | intron | coding_transcript | ||
5123081 | 5134269 | 25928 | 37116 | - | intron | coding_transcript | ||
5123081 | 5134269 | 25928 | 37116 | - | intron | coding_transcript | ||
5125035 | 5127336 | 27882 | 30183 | + | gene | Cyp4p2 | coding_transcript | |
5125035 | 5127336 | 27882 | 30183 | + | mrna | FBtr0088591 | coding_transcript | |
5125035 | 5125261 | 27882 | 28108 | + | exon | coding_transcript | ||
5125035 | 5125056 | 27882 | 27903 | + | five_prime_utr | coding_transcript | ||
5125057 | 5125261 | 27904 | 28108 | + | cds | coding_transcript | ||
5125262 | 5125341 | 28109 | 28188 | + | intron | coding_transcript | ||
5125342 | 5125542 | 28189 | 28389 | + | exon | coding_transcript | ||
5125342 | 5125542 | 28189 | 28389 | + | cds | coding_transcript | ||
5125543 | 5125596 | 28390 | 28443 | + | intron | coding_transcript | ||
5125597 | 5125678 | 28444 | 28525 | + | exon | coding_transcript | ||
5125597 | 5125678 | 28444 | 28525 | + | cds | coding_transcript | ||
5125679 | 5125835 | 28526 | 28682 | + | intron | coding_transcript | ||
5125836 | 5125936 | 28683 | 28783 | + | exon | coding_transcript | ||
5125836 | 5125936 | 28683 | 28783 | + | cds | coding_transcript | ||
5125937 | 5125994 | 28784 | 28841 | + | intron | coding_transcript | ||
5125995 | 5126265 | 28842 | 29112 | + | exon | coding_transcript | ||
5125995 | 5126265 | 28842 | 29112 | + | cds | coding_transcript | ||
5126266 | 5126323 | 29113 | 29170 | + | intron | coding_transcript | ||
5126324 | 5126544 | 29171 | 29391 | + | exon | coding_transcript | ||
5126324 | 5126544 | 29171 | 29391 | + | cds | coding_transcript | ||
5126545 | 5126608 | 29392 | 29455 | + | intron | coding_transcript | ||
5126609 | 5126923 | 29456 | 29770 | + | exon | coding_transcript | ||
5126609 | 5126923 | 29456 | 29770 | + | cds | coding_transcript | ||
5126924 | 5126995 | 29771 | 29842 | + | intron | coding_transcript | ||
5126996 | 5127336 | 29843 | 30183 | + | exon | coding_transcript | ||
5126996 | 5127162 | 29843 | 30009 | + | cds | coding_transcript | ||
5127163 | 5127336 | 30010 | 30183 | + | three_prime_utr | coding_transcript | ||
5127548 | 5129644 | 30395 | 32491 | + | gene | Cyp4p1 | coding_transcript | |
5127548 | 5129644 | 30395 | 32491 | + | mrna | FBtr0088592 | coding_transcript | |
5127548 | 5127785 | 30395 | 30632 | + | exon | coding_transcript | ||
5127548 | 5127586 | 30395 | 30433 | + | five_prime_utr | coding_transcript | ||
5127587 | 5127785 | 30434 | 30632 | + | cds | coding_transcript | ||
5127786 | 5127844 | 30633 | 30691 | + | intron | coding_transcript | ||
5127845 | 5128045 | 30692 | 30892 | + | exon | coding_transcript | ||
5127845 | 5128045 | 30692 | 30892 | + | cds | coding_transcript | ||
5128046 | 5128108 | 30893 | 30955 | + | intron | coding_transcript | ||
5128109 | 5128190 | 30956 | 31037 | + | exon | coding_transcript | ||
5128109 | 5128190 | 30956 | 31037 | + | cds | coding_transcript | ||
5128191 | 5128246 | 31038 | 31093 | + | intron | coding_transcript | ||
5128247 | 5128347 | 31094 | 31194 | + | exon | coding_transcript | ||
5128247 | 5128347 | 31094 | 31194 | + | cds | coding_transcript | ||
5128348 | 5128413 | 31195 | 31260 | + | intron | coding_transcript | ||
5128414 | 5128678 | 31261 | 31525 | + | exon | coding_transcript | ||
5128414 | 5128678 | 31261 | 31525 | + | cds | coding_transcript | ||
5128679 | 5128737 | 31526 | 31584 | + | intron | coding_transcript | ||
5128738 | 5128955 | 31585 | 31802 | + | exon | coding_transcript | ||
5128738 | 5128955 | 31585 | 31802 | + | cds | coding_transcript | ||
5128956 | 5129009 | 31803 | 31856 | + | intron | coding_transcript | ||
5129010 | 5129324 | 31857 | 32171 | + | exon | coding_transcript | ||
5129010 | 5129324 | 31857 | 32171 | + | cds | coding_transcript | ||
5129325 | 5129386 | 32172 | 32233 | + | intron | coding_transcript | ||
5129387 | 5129644 | 32234 | 32491 | + | exon | coding_transcript | ||
5129387 | 5129547 | 32234 | 32394 | + | cds | coding_transcript | ||
5129548 | 5129644 | 32395 | 32491 | + | three_prime_utr | coding_transcript | ||
5129846 | 5131915 | 32693 | 34762 | + | gene | Cyp4p3 | coding_transcript | |
5129846 | 5131915 | 32693 | 34762 | + | mrna | FBtr0088593 | coding_transcript | |
5129846 | 5130063 | 32693 | 32910 | + | exon | coding_transcript | ||
5129846 | 5129864 | 32693 | 32711 | + | five_prime_utr | coding_transcript | ||
5129865 | 5130063 | 32712 | 32910 | + | cds | coding_transcript | ||
5130064 | 5130145 | 32911 | 32992 | + | intron | coding_transcript | ||
5130146 | 5130346 | 32993 | 33193 | + | exon | coding_transcript | ||
5130146 | 5130346 | 32993 | 33193 | + | cds | coding_transcript | ||
5130347 | 5130402 | 33194 | 33249 | + | intron | coding_transcript | ||
5130403 | 5130484 | 33250 | 33331 | + | exon | coding_transcript | ||
5130403 | 5130484 | 33250 | 33331 | + | cds | coding_transcript | ||
5130485 | 5130543 | 33332 | 33390 | + | intron | coding_transcript | ||
5130544 | 5130644 | 33391 | 33491 | + | exon | coding_transcript | ||
5130544 | 5130644 | 33391 | 33491 | + | cds | coding_transcript | ||
5130645 | 5130703 | 33492 | 33550 | + | intron | coding_transcript | ||
5130704 | 5130974 | 33551 | 33821 | + | exon | coding_transcript | ||
5130704 | 5130974 | 33551 | 33821 | + | cds | coding_transcript | ||
5130975 | 5131026 | 33822 | 33873 | + | intron | coding_transcript | ||
5131027 | 5131244 | 33874 | 34091 | + | exon | coding_transcript | ||
5131027 | 5131244 | 33874 | 34091 | + | cds | coding_transcript | ||
5131245 | 5131301 | 34092 | 34148 | + | intron | coding_transcript | ||
5131302 | 5131616 | 34149 | 34463 | + | exon | coding_transcript | ||
5131302 | 5131616 | 34149 | 34463 | + | cds | coding_transcript | ||
5131617 | 5131675 | 34464 | 34522 | + | intron | coding_transcript | ||
5131676 | 5131915 | 34523 | 34762 | + | exon | coding_transcript | ||
5131676 | 5131836 | 34523 | 34683 | + | cds | coding_transcript | ||
5131837 | 5131915 | 34684 | 34762 | + | three_prime_utr | coding_transcript | ||
5134270 | 5134752 | 37117 | 37599 | - | exon | coding_transcript | ||
5134270 | 5134752 | 37117 | 37599 | - | exon | coding_transcript | ||
5134270 | 5134752 | 37117 | 37599 | - | exon | coding_transcript | ||
5134270 | 5134752 | 37117 | 37599 | - | exon | coding_transcript | ||
5134270 | 5134399 | 37117 | 37246 | - | cds | coding_transcript | ||
5134270 | 5134399 | 37117 | 37246 | - | cds | coding_transcript | ||
5134270 | 5134399 | 37117 | 37246 | - | cds | coding_transcript | ||
5134270 | 5134399 | 37117 | 37246 | - | cds | coding_transcript | ||
5134400 | 5134752 | 37247 | 37599 | - | five_prime_utr | coding_transcript | ||
5134400 | 5134752 | 37247 | 37599 | - | five_prime_utr | coding_transcript | ||
5134400 | 5134752 | 37247 | 37599 | - | five_prime_utr | coding_transcript | ||
5134400 | 5134752 | 37247 | 37599 | - | five_prime_utr | coding_transcript | ||
5139518 | 5140760 | 42365 | 43607 | + | gene | CG30343 | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
hig[17871]::S000169_fly_pretag_rev
GCGGCGAATCCTTGGCCCTTGGCTTCAATCTCTGGTGGTCCTGGAGGTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
hig[17871]::S000169_fly_pretag_fwd
ATGGCCGGTGGTCCGGTCCGATGCCGAAGTGCAAGAGCTACGAGGAGGTGgaagtgcataccaatcaggacccgc
|
Fasta |