Clone: 05512796956240418 B08
Tagged gene: CG1416
Identifier: FBgn0032961
Clone | FlyFos016897(pRedFlp-Hgr)(CG1416[32650]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2L | ||||||||
21758002 | 21760915 | 32356 | 36331 | - | gene | CG1416 | coding_transcript | |
21758002 | 21760915 | 32356 | 36331 | - | mrna | FBtr0085903 | coding_transcript | |
21758002 | 21760915 | 32356 | 36331 | - | mrna | FBtr0085904 | coding_transcript | |
21758002 | 21760915 | 32356 | 36331 | - | mrna | FBtr0085905 | coding_transcript | |
21760480 | 21760915 | 32356 | 33853 | - | exon | coding_transcript | ||
21760480 | 21760915 | 32356 | 33853 | - | exon | coding_transcript | ||
21760480 | 21760915 | 32356 | 33853 | - | exon | coding_transcript | ||
21760624 | 21760915 | 32356 | 32647 | - | three_prime_utr | coding_transcript | ||
21760624 | 21760915 | 32356 | 32647 | - | three_prime_utr | coding_transcript | ||
21760624 | 21760915 | 32356 | 32647 | - | three_prime_utr | coding_transcript | ||
21760480 | 21760623 | 32648 | 33853 | - | cds | coding_transcript | ||
21760480 | 21760623 | 32648 | 33853 | - | cds | coding_transcript | ||
21760480 | 21760623 | 32648 | 33853 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 32724 | 32757 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 32765 | 32836 | - | cds | BLRP | CLC | |
2337 | 2357 | 32837 | 32857 | - | cds | TEV | CLC | |
2313 | 2336 | 32858 | 32881 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 32882 | 32923 | - | cds | V5 | CLC | |
1548 | 2264 | 32930 | 33646 | - | cds | SGFP | CLC | |
1482 | 1541 | 33653 | 33712 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2L | ||||||||
21759367 | 21760479 | 33854 | 34966 | - | intron | coding_transcript | ||
21759367 | 21760479 | 33854 | 34966 | - | intron | coding_transcript | ||
21759367 | 21760479 | 33854 | 34966 | - | intron | coding_transcript | ||
21759231 | 21759366 | 34967 | 35102 | - | exon | coding_transcript | ||
21759231 | 21759366 | 34967 | 35102 | - | cds | coding_transcript | ||
21759231 | 21759366 | 34967 | 35102 | - | exon | coding_transcript | ||
21759231 | 21759366 | 34967 | 35102 | - | cds | coding_transcript | ||
21759231 | 21759366 | 34967 | 35102 | - | exon | coding_transcript | ||
21759231 | 21759366 | 34967 | 35102 | - | cds | coding_transcript | ||
21759079 | 21759230 | 35103 | 35254 | - | intron | coding_transcript | ||
21759079 | 21759230 | 35103 | 35254 | - | intron | coding_transcript | ||
21759079 | 21759230 | 35103 | 35254 | - | intron | coding_transcript | ||
21758442 | 21759078 | 35255 | 35891 | - | exon | coding_transcript | ||
21758442 | 21759078 | 35255 | 35891 | - | cds | coding_transcript | ||
21758442 | 21759078 | 35255 | 35891 | - | exon | coding_transcript | ||
21758442 | 21759078 | 35255 | 35891 | - | cds | coding_transcript | ||
21758442 | 21759078 | 35255 | 35891 | - | exon | coding_transcript | ||
21758442 | 21759078 | 35255 | 35891 | - | cds | coding_transcript | ||
21758360 | 21758441 | 35892 | 35973 | - | intron | coding_transcript | ||
21758360 | 21758441 | 35892 | 35973 | - | intron | coding_transcript | ||
21758360 | 21758441 | 35892 | 35973 | - | intron | coding_transcript | ||
21758002 | 21758359 | 35974 | 36331 | - | exon | coding_transcript | ||
21758202 | 21758359 | 35974 | 36131 | - | exon | coding_transcript | ||
21758202 | 21758359 | 35974 | 36131 | - | exon | coding_transcript | ||
21758212 | 21758359 | 35974 | 36121 | - | cds | coding_transcript | ||
21758212 | 21758359 | 35974 | 36121 | - | cds | coding_transcript | ||
21758212 | 21758359 | 35974 | 36121 | - | cds | coding_transcript | ||
21758002 | 21758211 | 36122 | 36331 | - | five_prime_utr | coding_transcript | ||
21758202 | 21758211 | 36122 | 36131 | - | five_prime_utr | coding_transcript | ||
21758202 | 21758211 | 36122 | 36131 | - | five_prime_utr | coding_transcript | ||
21758100 | 21758201 | 36132 | 36233 | - | intron | coding_transcript | ||
21758143 | 21758201 | 36132 | 36190 | - | intron | coding_transcript | ||
21758002 | 21758142 | 36191 | 36331 | - | exon | coding_transcript | ||
21758002 | 21758142 | 36191 | 36331 | - | five_prime_utr | coding_transcript | ||
21758002 | 21758099 | 36234 | 36331 | - | exon | coding_transcript | ||
21758002 | 21758099 | 36234 | 36331 | - | five_prime_utr | coding_transcript | ||
21741254 | 21757461 | 36872 | 53079 | + | gene | step | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG1416[32650]::S000169_fly_pretag_rev
CACCAAGCCCTCAATCATTCAGTGCAATCCGCACTAGAAGCGTCCTCTTActtgtcgtcgtcatccttgtagtca
|
Fasta |
CG1416[32650]::S000169_fly_pretag_fwd
ATAGCATCAAACAGACCTTTGGATTCGGTACCTCAATATCTGATGCCTTAgaagtgcataccaatcaggacccgc
|
Fasta |