Clone: 05512796956240418 F07

Tagged gene: amd
Identifier: FBgn0000075

Clone FlyFos016893(pRedFlp-Hgr)(amd[26011]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-2L
19127262 19129326 10694 12758 - gene l(2)37Cd coding_transcript
19123998 19126973 13047 16022 + gene l(2)37Cb coding_transcript
19122040 19123866 16154 17980 + gene l(2)37Cc coding_transcript
19116480 19120300 19720 23540 + gene Ddc coding_transcript
19114401 19116571 23449 25619 - gene CG10561 coding_transcript
19110159 19114110 25910 30923 - gene amd coding_transcript
19110159 19114110 25910 30923 - mrna FBtr0081153 coding_transcript
19111844 19114110 25910 29238 - mrna FBtr0081154 coding_transcript
19112794 19114110 25910 28288 - exon coding_transcript
19112794 19114110 25910 28288 - exon coding_transcript
19114012 19114110 25910 26008 - three_prime_utr coding_transcript
19114012 19114110 25910 26008 - three_prime_utr coding_transcript
19112794 19114011 26009 28288 - cds coding_transcript
19112794 19114011 26009 28288 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 26085 26118 - misc_recomb FRT CLC
2358 2429 26126 26197 - cds BLRP CLC
2337 2357 26198 26218 - cds TEV CLC
2313 2336 26219 26242 - cds Precision cut site CLC
2271 2312 26243 26284 - cds V5 CLC
1548 2264 26291 27007 - cds SGFP CLC
1482 1541 27014 27073 - cds 2xTY1 CLC
dmel-5.43-2L
19110647 19112793 28289 30435 - intron coding_transcript
19112316 19112793 28289 28766 - intron coding_transcript
19111844 19112315 28767 29238 - exon coding_transcript
19112001 19112315 28767 29081 - cds coding_transcript
19111844 19112000 29082 29238 - five_prime_utr coding_transcript
19110412 19110646 30436 30670 - exon coding_transcript
19110412 19110646 30436 30670 - cds coding_transcript
19110351 19110411 30671 30731 - intron coding_transcript
19110159 19110350 30732 30923 - exon coding_transcript
19110271 19110350 30732 30811 - cds coding_transcript
19110159 19110270 30812 30923 - five_prime_utr coding_transcript
19102044 19102909 38173 39038 - gene CG17344 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
amd[26011]::S000169_fly_pretag_rev
CAAACTAACTAGGTTGTCCCTAAACATAAATAGTTTATCCGTTTTTCTCActtgtcgtcgtcatccttgtagtca
fasta Fasta
amd[26011]::S000169_fly_pretag_fwd
ACTTCCAGATCCATCTGAGCACCGAAAATGCAACGCACGAGAAATCTCAGgaagtgcataccaatcaggacccgc
fasta Fasta