Clone: 05512796956240418 B06
Tagged gene: CG18130
Identifier: FBgn0030359
| Clone | FlyFos016881(pRedFlp-Hgr)(CG18130[32210]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-X | ||||||||
| 11903742 | 11906242 | 10243 | 12743 | + | gene | CG1492 | coding_transcript | |
| 11901211 | 11903940 | 12545 | 15274 | - | gene | CG1806 | coding_transcript | |
| 11886948 | 11897943 | 18542 | 29537 | + | gene | fw | coding_transcript | |
| 11884151 | 11886801 | 29684 | 33396 | + | gene | CG18130 | coding_transcript | |
| 11884151 | 11886801 | 29684 | 33396 | + | mrna | FBtr0073581 | coding_transcript | |
| 11886609 | 11886801 | 29684 | 29876 | + | exon | coding_transcript | ||
| 11886700 | 11886801 | 29684 | 29785 | + | five_prime_utr | coding_transcript | ||
| 11886609 | 11886699 | 29786 | 29876 | + | cds | coding_transcript | ||
| 11886551 | 11886608 | 29877 | 29934 | + | intron | coding_transcript | ||
| 11886447 | 11886550 | 29935 | 30038 | + | exon | coding_transcript | ||
| 11886447 | 11886550 | 29935 | 30038 | + | cds | coding_transcript | ||
| 11886388 | 11886446 | 30039 | 30097 | + | intron | coding_transcript | ||
| 11886316 | 11886387 | 30098 | 30169 | + | exon | coding_transcript | ||
| 11886316 | 11886387 | 30098 | 30169 | + | cds | coding_transcript | ||
| 11884151 | 11886327 | 30158 | 33396 | + | mrna | FBtr0299570 | coding_transcript | |
| 11886215 | 11886327 | 30158 | 30270 | + | exon | coding_transcript | ||
| 11886215 | 11886327 | 30158 | 30270 | + | five_prime_utr | coding_transcript | ||
| 11886263 | 11886315 | 30170 | 30222 | + | intron | coding_transcript | ||
| 11885010 | 11886262 | 30223 | 31475 | + | exon | coding_transcript | ||
| 11885010 | 11886262 | 30223 | 31475 | + | cds | coding_transcript | ||
| 11886160 | 11886214 | 30271 | 30325 | + | intron | coding_transcript | ||
| 11885010 | 11886159 | 30326 | 31475 | + | exon | coding_transcript | ||
| 11886104 | 11886159 | 30326 | 30381 | + | five_prime_utr | coding_transcript | ||
| 11885010 | 11886103 | 30382 | 31475 | + | cds | coding_transcript | ||
| 11884939 | 11885009 | 31476 | 31546 | + | intron | coding_transcript | ||
| 11884939 | 11885009 | 31476 | 31546 | + | intron | coding_transcript | ||
| 11884752 | 11884938 | 31547 | 31733 | + | exon | coding_transcript | ||
| 11884752 | 11884938 | 31547 | 31733 | + | cds | coding_transcript | ||
| 11884752 | 11884938 | 31547 | 31733 | + | exon | coding_transcript | ||
| 11884752 | 11884938 | 31547 | 31733 | + | cds | coding_transcript | ||
| 11884686 | 11884751 | 31734 | 31799 | + | intron | coding_transcript | ||
| 11884686 | 11884751 | 31734 | 31799 | + | intron | coding_transcript | ||
| 11884151 | 11884685 | 31800 | 33396 | + | exon | coding_transcript | ||
| 11884151 | 11884685 | 31800 | 33396 | + | exon | coding_transcript | ||
| 11884272 | 11884685 | 31800 | 33275 | + | cds | coding_transcript | ||
| 11884272 | 11884685 | 31800 | 33275 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 32211 | 32270 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 32277 | 32993 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 33000 | 33041 | + | cds | V5 | CLC | |
| 2313 | 2336 | 33042 | 33065 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 33066 | 33086 | + | cds | TEV | CLC | |
| 2358 | 2429 | 33087 | 33158 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 33166 | 33199 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-X | ||||||||
| 11884151 | 11884271 | 33276 | 33396 | + | three_prime_utr | coding_transcript | ||
| 11884151 | 11884271 | 33276 | 33396 | + | three_prime_utr | coding_transcript | ||
| 11882095 | 11882975 | 34572 | 35452 | + | gene | tsg | coding_transcript | |
| 11879565 | 11881754 | 35793 | 37982 | + | gene | gd | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG18130[32210]::S000169_fly_pretag_fwd
AAGCTCCTGCTCCTGCTCCTGCCGAGCCTGCACCTGAGCCAGCAGCCGAGgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG18130[32210]::S000169_fly_pretag_rev
AAAAATTTAGTTGCCAAATAATGAGTAATAATGAGTGCTATACTGGTTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|