Clone: 05512796956240418 G05
Tagged gene: fw
Identifier: FBgn0001083
Clone | FlyFos016881(pRedFlp-Hgr)(fw[28952]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-X | ||||||||
11903742 | 11906242 | 10243 | 12743 | + | gene | CG1492 | coding_transcript | |
11901211 | 11903940 | 12545 | 15274 | - | gene | CG1806 | coding_transcript | |
11886948 | 11897943 | 18542 | 30599 | + | gene | fw | coding_transcript | |
11886948 | 11897943 | 18542 | 30599 | + | mrna | FBtr0073580 | coding_transcript | |
11897780 | 11897943 | 18542 | 18705 | + | exon | coding_transcript | ||
11897780 | 11897943 | 18542 | 18705 | + | five_prime_utr | coding_transcript | ||
11896553 | 11897779 | 18706 | 19932 | + | intron | coding_transcript | ||
11895961 | 11896552 | 19933 | 20524 | + | exon | coding_transcript | ||
11896130 | 11896552 | 19933 | 20355 | + | five_prime_utr | coding_transcript | ||
11895961 | 11896129 | 20356 | 20524 | + | cds | coding_transcript | ||
11892534 | 11895960 | 20525 | 23951 | + | intron | coding_transcript | ||
11886948 | 11892533 | 23952 | 30599 | + | mrna | FBtr0112806 | coding_transcript | |
11892271 | 11892533 | 23952 | 24214 | + | exon | coding_transcript | ||
11892271 | 11892533 | 23952 | 24214 | + | cds | coding_transcript | ||
11892271 | 11892533 | 23952 | 24214 | + | exon | coding_transcript | ||
11892271 | 11892533 | 23952 | 24214 | + | five_prime_utr | coding_transcript | ||
11891596 | 11892270 | 24215 | 24889 | + | intron | coding_transcript | ||
11891596 | 11892270 | 24215 | 24889 | + | intron | coding_transcript | ||
11891121 | 11891595 | 24890 | 25364 | + | exon | coding_transcript | ||
11891121 | 11891595 | 24890 | 25364 | + | cds | coding_transcript | ||
11891121 | 11891595 | 24890 | 25364 | + | exon | coding_transcript | ||
11891121 | 11891595 | 24890 | 25364 | + | five_prime_utr | coding_transcript | ||
11891042 | 11891120 | 25365 | 25443 | + | intron | coding_transcript | ||
11891042 | 11891120 | 25365 | 25443 | + | intron | coding_transcript | ||
11890889 | 11891041 | 25444 | 25596 | + | exon | coding_transcript | ||
11890889 | 11891041 | 25444 | 25596 | + | cds | coding_transcript | ||
11890889 | 11891041 | 25444 | 25596 | + | exon | coding_transcript | ||
11890889 | 11891041 | 25444 | 25596 | + | five_prime_utr | coding_transcript | ||
11890824 | 11890888 | 25597 | 25661 | + | intron | coding_transcript | ||
11890824 | 11890888 | 25597 | 25661 | + | intron | coding_transcript | ||
11890674 | 11890823 | 25662 | 25811 | + | exon | coding_transcript | ||
11890674 | 11890823 | 25662 | 25811 | + | cds | coding_transcript | ||
11890674 | 11890823 | 25662 | 25811 | + | exon | coding_transcript | ||
11890674 | 11890823 | 25662 | 25811 | + | five_prime_utr | coding_transcript | ||
11890602 | 11890673 | 25812 | 25883 | + | intron | coding_transcript | ||
11890602 | 11890673 | 25812 | 25883 | + | intron | coding_transcript | ||
11890425 | 11890601 | 25884 | 26060 | + | exon | coding_transcript | ||
11890425 | 11890601 | 25884 | 26060 | + | cds | coding_transcript | ||
11890425 | 11890601 | 25884 | 26060 | + | exon | coding_transcript | ||
11890555 | 11890601 | 25884 | 25930 | + | five_prime_utr | coding_transcript | ||
11890425 | 11890554 | 25931 | 26060 | + | cds | coding_transcript | ||
11890265 | 11890424 | 26061 | 26220 | + | intron | coding_transcript | ||
11890265 | 11890424 | 26061 | 26220 | + | intron | coding_transcript | ||
11889969 | 11890264 | 26221 | 26516 | + | exon | coding_transcript | ||
11889969 | 11890264 | 26221 | 26516 | + | cds | coding_transcript | ||
11889969 | 11890264 | 26221 | 26516 | + | exon | coding_transcript | ||
11889969 | 11890264 | 26221 | 26516 | + | cds | coding_transcript | ||
11889905 | 11889968 | 26517 | 26580 | + | intron | coding_transcript | ||
11889905 | 11889968 | 26517 | 26580 | + | intron | coding_transcript | ||
11889496 | 11889904 | 26581 | 26989 | + | exon | coding_transcript | ||
11889496 | 11889904 | 26581 | 26989 | + | cds | coding_transcript | ||
11889496 | 11889904 | 26581 | 26989 | + | exon | coding_transcript | ||
11889496 | 11889904 | 26581 | 26989 | + | cds | coding_transcript | ||
11889398 | 11889495 | 26990 | 27087 | + | intron | coding_transcript | ||
11889398 | 11889495 | 26990 | 27087 | + | intron | coding_transcript | ||
11889218 | 11889397 | 27088 | 27267 | + | exon | coding_transcript | ||
11889218 | 11889397 | 27088 | 27267 | + | cds | coding_transcript | ||
11889218 | 11889397 | 27088 | 27267 | + | exon | coding_transcript | ||
11889218 | 11889397 | 27088 | 27267 | + | cds | coding_transcript | ||
11889154 | 11889217 | 27268 | 27331 | + | intron | coding_transcript | ||
11889154 | 11889217 | 27268 | 27331 | + | intron | coding_transcript | ||
11889027 | 11889153 | 27332 | 27458 | + | exon | coding_transcript | ||
11889027 | 11889153 | 27332 | 27458 | + | cds | coding_transcript | ||
11889027 | 11889153 | 27332 | 27458 | + | exon | coding_transcript | ||
11889027 | 11889153 | 27332 | 27458 | + | cds | coding_transcript | ||
11888961 | 11889026 | 27459 | 27524 | + | intron | coding_transcript | ||
11888961 | 11889026 | 27459 | 27524 | + | intron | coding_transcript | ||
11888848 | 11888960 | 27525 | 27637 | + | exon | coding_transcript | ||
11888848 | 11888960 | 27525 | 27637 | + | cds | coding_transcript | ||
11888848 | 11888960 | 27525 | 27637 | + | exon | coding_transcript | ||
11888848 | 11888960 | 27525 | 27637 | + | cds | coding_transcript | ||
11888764 | 11888847 | 27638 | 27721 | + | intron | coding_transcript | ||
11888764 | 11888847 | 27638 | 27721 | + | intron | coding_transcript | ||
11888410 | 11888763 | 27722 | 28075 | + | exon | coding_transcript | ||
11888410 | 11888763 | 27722 | 28075 | + | cds | coding_transcript | ||
11888410 | 11888763 | 27722 | 28075 | + | exon | coding_transcript | ||
11888410 | 11888763 | 27722 | 28075 | + | cds | coding_transcript | ||
11888350 | 11888409 | 28076 | 28135 | + | intron | coding_transcript | ||
11888350 | 11888409 | 28076 | 28135 | + | intron | coding_transcript | ||
11887825 | 11888349 | 28136 | 28660 | + | exon | coding_transcript | ||
11887825 | 11888349 | 28136 | 28660 | + | cds | coding_transcript | ||
11887825 | 11888349 | 28136 | 28660 | + | exon | coding_transcript | ||
11887825 | 11888349 | 28136 | 28660 | + | cds | coding_transcript | ||
11887664 | 11887824 | 28661 | 28821 | + | intron | coding_transcript | ||
11887664 | 11887824 | 28661 | 28821 | + | intron | coding_transcript | ||
11886948 | 11887663 | 28822 | 30599 | + | exon | coding_transcript | ||
11886948 | 11887663 | 28822 | 30599 | + | exon | coding_transcript | ||
11887530 | 11887663 | 28822 | 30017 | + | cds | coding_transcript | ||
11887530 | 11887663 | 28822 | 30017 | + | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
1482 | 1541 | 28953 | 29012 | + | cds | 2xTY1 | CLC | |
1548 | 2264 | 29019 | 29735 | + | cds | SGFP | CLC | |
2271 | 2312 | 29742 | 29783 | + | cds | V5 | CLC | |
2313 | 2336 | 29784 | 29807 | + | cds | Precision cut site | CLC | |
2337 | 2357 | 29808 | 29828 | + | cds | TEV | CLC | |
2358 | 2429 | 29829 | 29900 | + | cds | BLRP | CLC | |
3813 | 3846 | 29908 | 29941 | + | misc_recomb | FRT | CLC | |
dmel-5.43-X | ||||||||
11886948 | 11887529 | 30018 | 30599 | + | three_prime_utr | coding_transcript | ||
11886948 | 11887529 | 30018 | 30599 | + | three_prime_utr | coding_transcript | ||
11884151 | 11886801 | 30746 | 33396 | + | gene | CG18130 | coding_transcript | |
11882095 | 11882975 | 34572 | 35452 | + | gene | tsg | coding_transcript | |
11879565 | 11881754 | 35793 | 37982 | + | gene | gd | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
fw[28952]::S000169_fly_pretag_fwd
CGGAACCGGTGGCCAGTAATGTCATCACCATCAATGGGATTTCCGTCAGAgaagtgcataccaatcaggacccgc
|
Fasta |
fw[28952]::S000169_fly_pretag_rev
CAAAGTTGTATTGATATAGATATCGATATCGATATAGATATCGATCTCTActtgtcgtcgtcatccttgtagtca
|
Fasta |