Clone: 05512796956240418 A05

Tagged gene: l(1)dd4
Identifier: FBgn0001612

Clone FlyFos016860(pRedFlp-Hgr)(l(1)dd4[19213]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation(click to hide details)

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector(click to hide details)

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features(click to show details)

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-X
13630603 13638688 18679 27826 - gene l(1)dd4 coding_transcript
13630603 13638688 18679 27826 - mrna FBtr0073841 coding_transcript
13630603 13631839 18679 20977 - exon coding_transcript
13630603 13631134 18679 19210 - three_prime_utr coding_transcript
13631135 13631839 19211 20977 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 19287 19320 - misc_recomb FRT CLC
2358 2429 19328 19399 - cds BLRP CLC
2337 2357 19400 19420 - cds TEV CLC
2313 2336 19421 19444 - cds Precision cut site CLC
2271 2312 19445 19486 - cds V5 CLC
1548 2264 19493 20209 - cds SGFP CLC
1482 1541 20216 20275 - cds 2xTY1 CLC
dmel-5.43-X
13631840 13635688 20978 24826 - intron coding_transcript
13632176 13633210 21314 22348 + gene CG11134 coding_transcript
13632176 13633210 21314 22348 + mrna FBtr0073818 coding_transcript
13632176 13632409 21314 21547 + exon coding_transcript
13632176 13632281 21314 21419 + five_prime_utr coding_transcript
13632282 13632409 21420 21547 + cds coding_transcript
13632410 13632472 21548 21610 + intron coding_transcript
13632473 13632943 21611 22081 + exon coding_transcript
13632473 13632943 21611 22081 + cds coding_transcript
13632944 13633018 22082 22156 + intron coding_transcript
13633019 13633210 22157 22348 + exon coding_transcript
13633019 13633103 22157 22241 + cds coding_transcript
13633104 13633210 22242 22348 + three_prime_utr coding_transcript
13633777 13635134 22915 24272 + gene CG11151 coding_transcript
13633777 13635134 22915 24272 + mrna FBtr0073819 coding_transcript
13633777 13633893 22915 23031 + exon coding_transcript
13633777 13633893 22915 23031 + five_prime_utr coding_transcript
13633894 13633981 23032 23119 + intron coding_transcript
13633982 13634145 23120 23283 + exon coding_transcript
13633982 13634012 23120 23150 + five_prime_utr coding_transcript
13634013 13634145 23151 23283 + cds coding_transcript
13634146 13634710 23284 23848 + intron coding_transcript
13634711 13635134 23849 24272 + exon coding_transcript
13634711 13634925 23849 24063 + cds coding_transcript
13634926 13635134 24064 24272 + three_prime_utr coding_transcript
13635689 13636010 24827 25148 - exon coding_transcript
13635689 13636010 24827 25148 - cds coding_transcript
13636011 13636081 25149 25219 - intron coding_transcript
13636082 13636274 25220 25412 - exon coding_transcript
13636082 13636274 25220 25412 - cds coding_transcript
13636275 13636348 25413 25486 - intron coding_transcript
13636349 13637767 25487 26905 - exon coding_transcript
13636349 13637767 25487 26905 - cds coding_transcript
13637768 13638316 26906 27454 - intron coding_transcript
13638317 13638688 27455 27826 - exon coding_transcript
13638317 13638431 27455 27569 - cds coding_transcript
13638432 13638688 27570 27826 - five_prime_utr coding_transcript
13639610 13649421 28748 38559 - gene CG10990 coding_transcript
13650197 13650849 39335 39987 - gene CG32625 coding_transcript
13651210 13652631 40348 41769 + gene Rtc1 coding_transcript

Sets(click to hide details)

Oligos(click to hide details)

Name/Sequence Export
l(1)dd4[19213]::S000169_fly_pretag_fwd
TGTTCGCCGTGAACAGTCGCTTCGTGATATGTACGCCGTCCACTCAGGAAgaagtgcataccaatcaggacccgc
 fasta Fasta
l(1)dd4[19213]::S000169_fly_pretag_rev
TATGATGTATGGACACTGGGATAAACCGATTGCATGGACATTGGTCGCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta