Clone: 3207692103829951 A06

Tagged gene: Vha100-4
Identifier: FBgn0038613

Clone FlyFos016718(pRedFlp-Hgr)(Vha100-4[39889]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good
NGS-based tag validation bad

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
14232353 14238589 13972 20208 + gene CG31122 coding_transcript
14235923 14237092 15469 16638 + gene CG10864 coding_transcript
14230732 14231724 20837 21829 - gene CG7685 coding_transcript
14222717 14230448 22113 29844 - gene koko coding_transcript
14226091 14228435 24126 26470 + gene CG12333 coding_transcript
14216039 14224876 27685 36522 + gene Vha100-2 coding_transcript
14212555 14215525 37036 41068 + gene Vha100-4 coding_transcript
14212555 14215525 37036 41068 + mrna FBtr0083658 coding_transcript
14215288 14215525 37036 37273 + exon coding_transcript
14215441 14215525 37036 37120 + five_prime_utr coding_transcript
14215288 14215440 37121 37273 + cds coding_transcript
14215169 14215287 37274 37392 + intron coding_transcript
14213297 14215168 37393 39264 + exon coding_transcript
14213297 14215168 37393 39264 + cds coding_transcript
14213235 14213296 39265 39326 + intron coding_transcript
14212991 14213234 39327 39570 + exon coding_transcript
14212991 14213234 39327 39570 + cds coding_transcript
14212935 14212990 39571 39626 + intron coding_transcript
14212555 14212934 39627 41068 + exon coding_transcript
14212669 14212934 39627 40954 + cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
1482 1541 39890 39949 + cds 2xTY1 CLC
1548 2264 39956 40672 + cds SGFP CLC
2271 2312 40679 40720 + cds V5 CLC
2313 2336 40721 40744 + cds Precision cut site CLC
2337 2357 40745 40765 + cds TEV CLC
2358 2429 40766 40837 + cds BLRP CLC
3813 3846 40845 40878 + misc_recomb FRT CLC
dmel-5.43-3R
14212555 14212668 40955 41068 + three_prime_utr coding_transcript
14211550 14212611 41012 42073 - gene cona coding_transcript
14206851 14210723 42900 46772 + gene CG14309 coding_transcript
14203842 14206897 46726 49781 + gene CG7675 coding_transcript

Sets

Oligos

Name/Sequence Export
Vha100-4[39889]::S000169_fly_pretag_rev
ATTAAACCTTCTTCAAGGAGCGAATCACGATGGCTATCCTGATGGTTCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
Vha100-4[39889]::S000169_fly_pretag_fwd
CGTTCACGCCATTCAGCTTTAAGGATATTTTGATCGTCGTCGAAGATGATgaagtgcataccaatcaggacccgc
 fasta Fasta