Clone: 7757956326115614 B08
Tagged gene: fws
Identifier: FBgn0024689
| Clone | FlyFos016604(pRedFlp-Hgr)(fws[34930]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-2L | ||||||||
| 17499268 | 17501114 | 12354 | 14200 | + | gene | CG6412 | coding_transcript | |
| 17497994 | 17498787 | 14681 | 15474 | + | gene | CG15142 | coding_transcript | |
| 17486806 | 17497203 | 16265 | 26662 | + | gene | qua | coding_transcript | |
| 17486597 | 17486779 | 26689 | 26871 | - | gene | CG43220 | coding_transcript | |
| 17486153 | 17486340 | 27128 | 27315 | - | gene | CG43645 | coding_transcript | |
| 17485791 | 17486005 | 27463 | 27677 | - | gene | CG43221 | coding_transcript | |
| 17484518 | 17485624 | 27844 | 28950 | - | gene | CG5131 | coding_transcript | |
| 17481988 | 17484302 | 29166 | 31480 | + | gene | CG6453 | coding_transcript | |
| 17481211 | 17482037 | 31431 | 32257 | - | gene | CG5110 | coding_transcript | |
| 17478442 | 17481212 | 32256 | 36088 | + | gene | fws | coding_transcript | |
| 17478442 | 17481212 | 32256 | 36088 | + | mrna | FBtr0305686 | coding_transcript | |
| 17481184 | 17481212 | 32256 | 32284 | + | exon | coding_transcript | ||
| 17481184 | 17481212 | 32256 | 32284 | + | five_prime_utr | coding_transcript | ||
| 17481086 | 17481183 | 32285 | 32382 | + | intron | coding_transcript | ||
| 17480984 | 17481085 | 32383 | 32484 | + | exon | coding_transcript | ||
| 17480984 | 17481085 | 32383 | 32484 | + | five_prime_utr | coding_transcript | ||
| 17478442 | 17481067 | 32401 | 36088 | + | mrna | FBtr0080999 | coding_transcript | |
| 17478442 | 17481067 | 32401 | 36088 | + | mrna | FBtr0305685 | coding_transcript | |
| 17480969 | 17481067 | 32401 | 32499 | + | exon | coding_transcript | ||
| 17480969 | 17481067 | 32401 | 32499 | + | five_prime_utr | coding_transcript | ||
| 17480973 | 17481067 | 32401 | 32495 | + | exon | coding_transcript | ||
| 17480973 | 17481067 | 32401 | 32495 | + | five_prime_utr | coding_transcript | ||
| 17478442 | 17481032 | 32436 | 36088 | + | mrna | FBtr0305687 | coding_transcript | |
| 17480984 | 17481032 | 32436 | 32484 | + | exon | coding_transcript | ||
| 17480984 | 17481032 | 32436 | 32484 | + | five_prime_utr | coding_transcript | ||
| 17478442 | 17481028 | 32440 | 36088 | + | mrna | FBtr0081000 | coding_transcript | |
| 17480296 | 17481028 | 32440 | 33172 | + | exon | coding_transcript | ||
| 17480902 | 17481028 | 32440 | 32566 | + | five_prime_utr | coding_transcript | ||
| 17480920 | 17480983 | 32485 | 32548 | + | intron | coding_transcript | ||
| 17480920 | 17480983 | 32485 | 32548 | + | intron | coding_transcript | ||
| 17480920 | 17480972 | 32496 | 32548 | + | intron | coding_transcript | ||
| 17480920 | 17480968 | 32500 | 32548 | + | intron | coding_transcript | ||
| 17480296 | 17480919 | 32549 | 33172 | + | exon | coding_transcript | ||
| 17480296 | 17480919 | 32549 | 33172 | + | exon | coding_transcript | ||
| 17480296 | 17480919 | 32549 | 33172 | + | exon | coding_transcript | ||
| 17480296 | 17480919 | 32549 | 33172 | + | exon | coding_transcript | ||
| 17480902 | 17480919 | 32549 | 32566 | + | five_prime_utr | coding_transcript | ||
| 17480902 | 17480919 | 32549 | 32566 | + | five_prime_utr | coding_transcript | ||
| 17480902 | 17480919 | 32549 | 32566 | + | five_prime_utr | coding_transcript | ||
| 17480902 | 17480919 | 32549 | 32566 | + | five_prime_utr | coding_transcript | ||
| 17480296 | 17480901 | 32567 | 33172 | + | cds | coding_transcript | ||
| 17480296 | 17480901 | 32567 | 33172 | + | cds | coding_transcript | ||
| 17480296 | 17480901 | 32567 | 33172 | + | cds | coding_transcript | ||
| 17480296 | 17480901 | 32567 | 33172 | + | cds | coding_transcript | ||
| 17480296 | 17480901 | 32567 | 33172 | + | cds | coding_transcript | ||
| 17480243 | 17480295 | 33173 | 33225 | + | intron | coding_transcript | ||
| 17480243 | 17480295 | 33173 | 33225 | + | intron | coding_transcript | ||
| 17480243 | 17480295 | 33173 | 33225 | + | intron | coding_transcript | ||
| 17480243 | 17480295 | 33173 | 33225 | + | intron | coding_transcript | ||
| 17480243 | 17480295 | 33173 | 33225 | + | intron | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | exon | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | cds | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | exon | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | cds | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | exon | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | cds | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | exon | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | cds | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | exon | coding_transcript | ||
| 17479172 | 17480242 | 33226 | 34296 | + | cds | coding_transcript | ||
| 17479114 | 17479171 | 34297 | 34354 | + | intron | coding_transcript | ||
| 17479114 | 17479171 | 34297 | 34354 | + | intron | coding_transcript | ||
| 17479114 | 17479171 | 34297 | 34354 | + | intron | coding_transcript | ||
| 17479114 | 17479171 | 34297 | 34354 | + | intron | coding_transcript | ||
| 17479114 | 17479171 | 34297 | 34354 | + | intron | coding_transcript | ||
| 17478442 | 17479113 | 34355 | 36088 | + | exon | coding_transcript | ||
| 17478442 | 17479113 | 34355 | 36088 | + | exon | coding_transcript | ||
| 17478442 | 17479113 | 34355 | 36088 | + | exon | coding_transcript | ||
| 17478442 | 17479113 | 34355 | 36088 | + | exon | coding_transcript | ||
| 17478442 | 17479113 | 34355 | 36088 | + | exon | coding_transcript | ||
| 17478535 | 17479113 | 34355 | 35995 | + | cds | coding_transcript | ||
| 17478535 | 17479113 | 34355 | 35995 | + | cds | coding_transcript | ||
| 17478535 | 17479113 | 34355 | 35995 | + | cds | coding_transcript | ||
| 17478535 | 17479113 | 34355 | 35995 | + | cds | coding_transcript | ||
| 17478535 | 17479113 | 34355 | 35995 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 34931 | 34990 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 34997 | 35713 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 35720 | 35761 | + | cds | V5 | CLC | |
| 2313 | 2336 | 35762 | 35785 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 35786 | 35806 | + | cds | TEV | CLC | |
| 2358 | 2429 | 35807 | 35878 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 35886 | 35919 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-2L | ||||||||
| 17478442 | 17478534 | 35996 | 36088 | + | three_prime_utr | coding_transcript | ||
| 17478442 | 17478534 | 35996 | 36088 | + | three_prime_utr | coding_transcript | ||
| 17478442 | 17478534 | 35996 | 36088 | + | three_prime_utr | coding_transcript | ||
| 17478442 | 17478534 | 35996 | 36088 | + | three_prime_utr | coding_transcript | ||
| 17478442 | 17478534 | 35996 | 36088 | + | three_prime_utr | coding_transcript | ||
| 17474912 | 17477886 | 36644 | 39618 | + | gene | Aac11 | coding_transcript | |
| 17471668 | 17474773 | 39757 | 42862 | - | gene | Sgt | coding_transcript | |
| 17460817 | 17473255 | 41275 | 53713 | + | gene | BicD | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
fws[34930]::S000169_fly_pretag_rev
CTTACATACATACATACATAGTTCTAGATACATAATACATTAGACATTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|
|
fws[34930]::S000169_fly_pretag_fwd
TTTACCCCATGATGGTAGATTATTTTGAACAGGCCTTAAAGGCACTTCCAgaagtgcataccaatcaggacccgc
|
Fasta
|