Clone: 7757956326115614 B07
Tagged gene: CG7694
Identifier: FBgn0038627
| Clone | FlyFos016585(pRedFlp-Hgr)(CG7694[13722]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation(click to hide details)
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3R | ||||||||
| 14416822 | 14418600 | 11497 | 13275 | - | gene | CG14306 | coding_transcript | |
| 14398817 | 14416448 | 13649 | 32342 | - | gene | CG7694 | coding_transcript | |
| 14398817 | 14416448 | 13649 | 32342 | - | mrna | FBtr0083632 | coding_transcript | |
| 14415716 | 14416448 | 13649 | 15443 | - | mrna | FBtr0290211 | coding_transcript | |
| 14416243 | 14416448 | 13649 | 14916 | - | exon | coding_transcript | ||
| 14416243 | 14416448 | 13649 | 14916 | - | exon | coding_transcript | ||
| 14416378 | 14416448 | 13649 | 13719 | - | three_prime_utr | coding_transcript | ||
| 14416378 | 14416448 | 13649 | 13719 | - | three_prime_utr | coding_transcript | ||
| 14416243 | 14416377 | 13720 | 14916 | - | cds | coding_transcript | ||
| 14416243 | 14416377 | 13720 | 14916 | - | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 2437 | 2470 | 13796 | 13829 | - | misc_recomb | FRT | CLC | |
| 2358 | 2429 | 13837 | 13908 | - | cds | BLRP | CLC | |
| 2337 | 2357 | 13909 | 13929 | - | cds | TEV | CLC | |
| 2313 | 2336 | 13930 | 13953 | - | cds | Precision cut site | CLC | |
| 2271 | 2312 | 13954 | 13995 | - | cds | V5 | CLC | |
| 1548 | 2264 | 14002 | 14718 | - | cds | SGFP | CLC | |
| 1482 | 1541 | 14725 | 14784 | - | cds | 2xTY1 | CLC | |
| dmel-5.43-3R | ||||||||
| 14416150 | 14416242 | 14917 | 15009 | - | intron | coding_transcript | ||
| 14416150 | 14416242 | 14917 | 15009 | - | intron | coding_transcript | ||
| 14415716 | 14416149 | 15010 | 15443 | - | exon | coding_transcript | ||
| 14415839 | 14416149 | 15010 | 15320 | - | exon | coding_transcript | ||
| 14415841 | 14416149 | 15010 | 15318 | - | cds | coding_transcript | ||
| 14415841 | 14416149 | 15010 | 15318 | - | cds | coding_transcript | ||
| 14415716 | 14415840 | 15319 | 15443 | - | five_prime_utr | coding_transcript | ||
| 14415839 | 14415840 | 15319 | 15320 | - | five_prime_utr | coding_transcript | ||
| 14403307 | 14415838 | 15321 | 27852 | - | intron | coding_transcript | ||
| 14398817 | 14415175 | 15984 | 32342 | - | gene | fray | coding_transcript | |
| 14398817 | 14415175 | 15984 | 32342 | - | mrna | FBtr0083637 | coding_transcript | |
| 14398817 | 14415175 | 15984 | 32342 | - | mrna | FBtr0290107 | coding_transcript | |
| 14410197 | 14415175 | 15984 | 20962 | - | mrna | FBtr0083638 | coding_transcript | |
| 14411602 | 14415175 | 15984 | 19557 | - | mrna | FBtr0290209 | coding_transcript | |
| 14411662 | 14415175 | 15984 | 19497 | - | mrna | FBtr0290210 | coding_transcript | |
| 14412001 | 14415175 | 15984 | 19158 | - | exon | coding_transcript | ||
| 14412001 | 14415175 | 15984 | 19158 | - | exon | coding_transcript | ||
| 14412001 | 14415175 | 15984 | 19158 | - | exon | coding_transcript | ||
| 14412001 | 14415175 | 15984 | 19158 | - | exon | coding_transcript | ||
| 14412001 | 14415175 | 15984 | 19158 | - | exon | coding_transcript | ||
| 14414091 | 14415175 | 15984 | 17068 | - | three_prime_utr | coding_transcript | ||
| 14414091 | 14415175 | 15984 | 17068 | - | three_prime_utr | coding_transcript | ||
| 14414091 | 14415175 | 15984 | 17068 | - | three_prime_utr | coding_transcript | ||
| 14414091 | 14415175 | 15984 | 17068 | - | three_prime_utr | coding_transcript | ||
| 14414091 | 14415175 | 15984 | 17068 | - | three_prime_utr | coding_transcript | ||
| 14412432 | 14414090 | 17069 | 18727 | - | cds | coding_transcript | ||
| 14412432 | 14414090 | 17069 | 18727 | - | cds | coding_transcript | ||
| 14412432 | 14414090 | 17069 | 18727 | - | cds | coding_transcript | ||
| 14412432 | 14414090 | 17069 | 18727 | - | cds | coding_transcript | ||
| 14412432 | 14414090 | 17069 | 18727 | - | cds | coding_transcript | ||
| 14412001 | 14412431 | 18728 | 19158 | - | five_prime_utr | coding_transcript | ||
| 14412001 | 14412431 | 18728 | 19158 | - | five_prime_utr | coding_transcript | ||
| 14412001 | 14412431 | 18728 | 19158 | - | five_prime_utr | coding_transcript | ||
| 14412001 | 14412431 | 18728 | 19158 | - | five_prime_utr | coding_transcript | ||
| 14412001 | 14412431 | 18728 | 19158 | - | five_prime_utr | coding_transcript | ||
| 14399248 | 14412000 | 19159 | 31911 | - | intron | coding_transcript | ||
| 14403307 | 14412000 | 19159 | 27852 | - | intron | coding_transcript | ||
| 14410309 | 14412000 | 19159 | 20850 | - | intron | coding_transcript | ||
| 14411697 | 14412000 | 19159 | 19462 | - | intron | coding_transcript | ||
| 14411790 | 14412000 | 19159 | 19369 | - | intron | coding_transcript | ||
| 14411662 | 14411789 | 19370 | 19497 | - | exon | coding_transcript | ||
| 14411662 | 14411789 | 19370 | 19497 | - | five_prime_utr | coding_transcript | ||
| 14411602 | 14411696 | 19463 | 19557 | - | exon | coding_transcript | ||
| 14411602 | 14411696 | 19463 | 19557 | - | five_prime_utr | coding_transcript | ||
| 14410197 | 14410308 | 20851 | 20962 | - | exon | coding_transcript | ||
| 14410197 | 14410308 | 20851 | 20962 | - | five_prime_utr | coding_transcript | ||
| 14403289 | 14403306 | 27853 | 27870 | - | exon | coding_transcript | ||
| 14403289 | 14403306 | 27853 | 27870 | - | five_prime_utr | coding_transcript | ||
| 14403289 | 14403306 | 27853 | 27870 | - | exon | coding_transcript | ||
| 14403289 | 14403306 | 27853 | 27870 | - | five_prime_utr | coding_transcript | ||
| 14399248 | 14403288 | 27871 | 31911 | - | intron | coding_transcript | ||
| 14399248 | 14403288 | 27871 | 31911 | - | intron | coding_transcript | ||
| 14398817 | 14399247 | 31912 | 32342 | - | exon | coding_transcript | ||
| 14398817 | 14399247 | 31912 | 32342 | - | five_prime_utr | coding_transcript | ||
| 14398817 | 14399247 | 31912 | 32342 | - | exon | coding_transcript | ||
| 14398817 | 14399247 | 31912 | 32342 | - | five_prime_utr | coding_transcript | ||
| 14398817 | 14399247 | 31912 | 32342 | - | exon | coding_transcript | ||
| 14398817 | 14399247 | 31912 | 32342 | - | five_prime_utr | coding_transcript | ||
| 14390214 | 14390895 | 40264 | 40945 | + | gene | CG43210 | coding_transcript | |
| 14390214 | 14390895 | 40264 | 40945 | + | gene | CG43194 | coding_transcript | |
| 14385591 | 14387075 | 44084 | 45568 | - | gene | CG7691 | coding_transcript | |
Sets(click to hide details)
Oligos(click to hide details)
| Name/Sequence | Export |
|---|---|
|
CG7694[13722]::S000169_fly_pretag_fwd
AAGCTAACCGACGGGAGCGGGAGAACACTCTTTTGGATTCCATGTTCGGCgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG7694[13722]::S000169_fly_pretag_rev
TACTACAAATTTGACCAAATACCGCTGTCGAATCGATTAACTCCAAGTTActtgtcgtcgtcatccttgtagtca
|
Fasta
|