Clone: 02182476214419926 A11

Tagged gene: Hmt-1
Identifier: FBgn0038376

Clone FlyFos015867(pRedFlp-Hgr)(Hmt-1[22558]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
11670188 11679301 12926 22039 - gene CG31150 coding_transcript
11672230 11674158 14968 16896 + gene CG4546 coding_transcript
11679590 11683194 22328 26994 - gene Hmt-1 coding_transcript
11679590 11683194 22328 26994 - mrna FBtr0083188 coding_transcript
11679590 11681187 22328 24987 - exon coding_transcript
11679590 11679817 22328 22555 - three_prime_utr coding_transcript
11679818 11681187 22556 24987 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 22632 22665 - misc_recomb FRT CLC
2358 2429 22673 22744 - cds BLRP CLC
2337 2357 22745 22765 - cds TEV CLC
2313 2336 22766 22789 - cds Precision cut site CLC
2271 2312 22790 22831 - cds V5 CLC
1548 2264 22838 23554 - cds SGFP CLC
1482 1541 23561 23620 - cds 2xTY1 CLC
dmel-5.43-3R
11681188 11681250 24988 25050 - intron coding_transcript
11681251 11681655 25051 25455 - exon coding_transcript
11681251 11681655 25051 25455 - cds coding_transcript
11681656 11681718 25456 25518 - intron coding_transcript
11681719 11682044 25519 25844 - exon coding_transcript
11681719 11682044 25519 25844 - cds coding_transcript
11682045 11682104 25845 25904 - intron coding_transcript
11682105 11682304 25905 26104 - exon coding_transcript
11682105 11682304 25905 26104 - cds coding_transcript
11682305 11682359 26105 26159 - intron coding_transcript
11682360 11682675 26160 26475 - exon coding_transcript
11682360 11682659 26160 26459 - cds coding_transcript
11682660 11682675 26460 26475 - five_prime_utr coding_transcript
11682676 11683051 26476 26851 - intron coding_transcript
11683052 11683194 26852 26994 - exon coding_transcript
11683052 11683194 26852 26994 - five_prime_utr coding_transcript
11683801 11695774 27601 39574 - gene CG31183 coding_transcript
11685918 11687200 29718 31000 + gene CG9632 coding_transcript

Sets

Oligos

Name/Sequence Export
Hmt-1[22558]::S000169_fly_pretag_rev
CACATGGAATCAGGAATATCAGAAACTACTCTGTATGTCACTTAAGGCTActtgtcgtcgtcatccttgtagtca
 fasta Fasta
Hmt-1[22558]::S000169_fly_pretag_fwd
GAACGGGTGGTGCCCACTTCAGGGCAGGACATGCTCATGGGGGAGCACGCgaagtgcataccaatcaggacccgc
 fasta Fasta