Clone: 02182476214419926 H09
Tagged gene: CG30047
Identifier: FBgn0050047
Clone | FlyFos015851(pRedFlp-Hgr)(CG30047[16528]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
---|---|
Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation(click to hide details)
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector(click to hide details)
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features(click to show details)
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-2R | ||||||||
8243176 | 8246592 | 12731 | 16147 | - | gene | CG30049 | coding_transcript | |
8239298 | 8242918 | 16405 | 21087 | - | gene | CG30047 | coding_transcript | |
8239298 | 8242918 | 16405 | 21087 | - | mrna | FBtr0087905 | coding_transcript | |
8242630 | 8242918 | 16405 | 17755 | - | exon | coding_transcript | ||
8242798 | 8242918 | 16405 | 16525 | - | three_prime_utr | coding_transcript | ||
8242630 | 8242797 | 16526 | 17755 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 16602 | 16635 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 16643 | 16714 | - | cds | BLRP | CLC | |
2337 | 2357 | 16715 | 16735 | - | cds | TEV | CLC | |
2313 | 2336 | 16736 | 16759 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 16760 | 16801 | - | cds | V5 | CLC | |
1548 | 2264 | 16808 | 17524 | - | cds | SGFP | CLC | |
1482 | 1541 | 17531 | 17590 | - | cds | 2xTY1 | CLC | |
dmel-5.43-2R | ||||||||
8242572 | 8242629 | 17756 | 17813 | - | intron | coding_transcript | ||
8242071 | 8242571 | 17814 | 18314 | - | exon | coding_transcript | ||
8242071 | 8242571 | 17814 | 18314 | - | cds | coding_transcript | ||
8242010 | 8242070 | 18315 | 18375 | - | intron | coding_transcript | ||
8241866 | 8242009 | 18376 | 18519 | - | exon | coding_transcript | ||
8241866 | 8242009 | 18376 | 18519 | - | cds | coding_transcript | ||
8241812 | 8241865 | 18520 | 18573 | - | intron | coding_transcript | ||
8241627 | 8241811 | 18574 | 18758 | - | exon | coding_transcript | ||
8241627 | 8241811 | 18574 | 18758 | - | cds | coding_transcript | ||
8241570 | 8241626 | 18759 | 18815 | - | intron | coding_transcript | ||
8241389 | 8241569 | 18816 | 18996 | - | exon | coding_transcript | ||
8241389 | 8241569 | 18816 | 18996 | - | cds | coding_transcript | ||
8241330 | 8241388 | 18997 | 19055 | - | intron | coding_transcript | ||
8240946 | 8241329 | 19056 | 19439 | - | exon | coding_transcript | ||
8240946 | 8241329 | 19056 | 19439 | - | cds | coding_transcript | ||
8240882 | 8240945 | 19440 | 19503 | - | intron | coding_transcript | ||
8240727 | 8240881 | 19504 | 19658 | - | exon | coding_transcript | ||
8240727 | 8240881 | 19504 | 19658 | - | cds | coding_transcript | ||
8240668 | 8240726 | 19659 | 19717 | - | intron | coding_transcript | ||
8240547 | 8240667 | 19718 | 19838 | - | exon | coding_transcript | ||
8240547 | 8240667 | 19718 | 19838 | - | cds | coding_transcript | ||
8240324 | 8240546 | 19839 | 20061 | - | intron | coding_transcript | ||
8240239 | 8240323 | 20062 | 20146 | - | exon | coding_transcript | ||
8240239 | 8240323 | 20062 | 20146 | - | cds | coding_transcript | ||
8240177 | 8240238 | 20147 | 20208 | - | intron | coding_transcript | ||
8240002 | 8240176 | 20209 | 20383 | - | exon | coding_transcript | ||
8240002 | 8240176 | 20209 | 20383 | - | cds | coding_transcript | ||
8239945 | 8240001 | 20384 | 20440 | - | intron | coding_transcript | ||
8239425 | 8239944 | 20441 | 20960 | - | exon | coding_transcript | ||
8239425 | 8239944 | 20441 | 20960 | - | cds | coding_transcript | ||
8239367 | 8239424 | 20961 | 21018 | - | intron | coding_transcript | ||
8239298 | 8239366 | 21019 | 21087 | - | exon | coding_transcript | ||
8239346 | 8239366 | 21019 | 21039 | - | cds | coding_transcript | ||
8239298 | 8239345 | 21040 | 21087 | - | five_prime_utr | coding_transcript | ||
8232591 | 8238583 | 21802 | 27794 | - | gene | ana3 | coding_transcript | |
8227115 | 8232118 | 28267 | 33270 | + | gene | CG8839 | coding_transcript | |
8225307 | 8227050 | 33335 | 35078 | - | gene | Den1 | coding_transcript | |
8224487 | 8225223 | 35162 | 35898 | - | gene | CG34021 | coding_transcript | |
8222822 | 8223710 | 36675 | 37563 | - | gene | CG8490 | coding_transcript | |
8214179 | 8221324 | 39061 | 46206 | - | gene | garz | coding_transcript |
Sets(click to hide details)
Oligos(click to hide details)
Name/Sequence | Export |
---|---|
CG30047[16528]::S000169_fly_pretag_fwd
ACTTTGCTCACGTTATGGAATGGCCTACGTTGTATGAACGATATATATTCgaagtgcataccaatcaggacccgc
|
Fasta |
CG30047[16528]::S000169_fly_pretag_rev
GGTTCTTAGTAATAAAAGGTAGCGAGATGTGCCATAAGTCCAGCAACTTActtgtcgtcgtcatccttgtagtca
|
Fasta |