Clone: 02182476214419926 D09
Tagged gene: CG32106
Identifier: FBgn0052106
| Clone | FlyFos015847(pRedFlp-Hgr)(CG32106[37601]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
|---|---|
| Library | FlyFos 5.43 D.mel in E. coli EPI300 |
| Genome | Species: Drosophila melanogaster, Release: 5.43 |
GenBank
GFF
Validation
| Type | Status | Download / View |
|---|---|---|
| Grows in selection | good | |
| NGS-based tag validation | bad |
Genes in pFlyFos vector
| Gene | Clone relative | Genome relative | |||||
|---|---|---|---|---|---|---|---|
| Name | Length | Start | End | Strand | Start | End | Strand |
| DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features
| Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
|---|---|---|---|---|---|---|---|---|
| pFlyFos | ||||||||
| 1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
| 4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
| 310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
| 727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
| 1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
| 2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
| 2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
| 3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
| 4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
| 5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
| 6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
| 7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
| 8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
| 8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
| 8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
| 8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
| 9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
| 9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
| 9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
| 9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
| dmel-5.43-3L | ||||||||
| 12783293 | 12789184 | 15517 | 21408 | - | gene | CG42709 | coding_transcript | |
| 12774425 | 12777477 | 27224 | 30276 | - | gene | CG17666 | coding_transcript | |
| 12771848 | 12774121 | 30580 | 32853 | + | gene | CG10969 | coding_transcript | |
| 12767051 | 12771816 | 32885 | 38712 | + | gene | CG32106 | coding_transcript | |
| 12767051 | 12771816 | 32885 | 38712 | + | mrna | FBtr0307887 | coding_transcript | |
| 12767051 | 12771816 | 32885 | 38712 | + | mrna | FBtr0307888 | coding_transcript | |
| 12771379 | 12771816 | 32885 | 33322 | + | exon | coding_transcript | ||
| 12771379 | 12771816 | 32885 | 33322 | + | exon | coding_transcript | ||
| 12771560 | 12771816 | 32885 | 33141 | + | five_prime_utr | coding_transcript | ||
| 12771560 | 12771816 | 32885 | 33141 | + | five_prime_utr | coding_transcript | ||
| 12771379 | 12771559 | 33142 | 33322 | + | cds | coding_transcript | ||
| 12771379 | 12771559 | 33142 | 33322 | + | cds | coding_transcript | ||
| 12771324 | 12771378 | 33323 | 33377 | + | intron | coding_transcript | ||
| 12771324 | 12771378 | 33323 | 33377 | + | intron | coding_transcript | ||
| 12771125 | 12771323 | 33378 | 33576 | + | exon | coding_transcript | ||
| 12771125 | 12771323 | 33378 | 33576 | + | cds | coding_transcript | ||
| 12771125 | 12771323 | 33378 | 33576 | + | exon | coding_transcript | ||
| 12771125 | 12771323 | 33378 | 33576 | + | cds | coding_transcript | ||
| 12771025 | 12771124 | 33577 | 33676 | + | intron | coding_transcript | ||
| 12771073 | 12771124 | 33577 | 33628 | + | intron | coding_transcript | ||
| 12768688 | 12771072 | 33629 | 36013 | + | exon | coding_transcript | ||
| 12768688 | 12771072 | 33629 | 36013 | + | cds | coding_transcript | ||
| 12768688 | 12771024 | 33677 | 36013 | + | exon | coding_transcript | ||
| 12768688 | 12771024 | 33677 | 36013 | + | cds | coding_transcript | ||
| 12768634 | 12768687 | 36014 | 36067 | + | intron | coding_transcript | ||
| 12768634 | 12768687 | 36014 | 36067 | + | intron | coding_transcript | ||
| 12768556 | 12768633 | 36068 | 36145 | + | exon | coding_transcript | ||
| 12768556 | 12768633 | 36068 | 36145 | + | cds | coding_transcript | ||
| 12768556 | 12768633 | 36068 | 36145 | + | exon | coding_transcript | ||
| 12768556 | 12768633 | 36068 | 36145 | + | cds | coding_transcript | ||
| 12768496 | 12768555 | 36146 | 36205 | + | intron | coding_transcript | ||
| 12768496 | 12768555 | 36146 | 36205 | + | intron | coding_transcript | ||
| 12767051 | 12768495 | 36206 | 38712 | + | exon | coding_transcript | ||
| 12767051 | 12768495 | 36206 | 38712 | + | exon | coding_transcript | ||
| 12767097 | 12768495 | 36206 | 38666 | + | cds | coding_transcript | ||
| 12767097 | 12768495 | 36206 | 38666 | + | cds | coding_transcript | ||
| p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
| 1482 | 1541 | 37602 | 37661 | + | cds | 2xTY1 | CLC | |
| 1548 | 2264 | 37668 | 38384 | + | cds | SGFP | CLC | |
| 2271 | 2312 | 38391 | 38432 | + | cds | V5 | CLC | |
| 2313 | 2336 | 38433 | 38456 | + | cds | Precision cut site | CLC | |
| 2337 | 2357 | 38457 | 38477 | + | cds | TEV | CLC | |
| 2358 | 2429 | 38478 | 38549 | + | cds | BLRP | CLC | |
| 3813 | 3846 | 38557 | 38590 | + | misc_recomb | FRT | CLC | |
| dmel-5.43-3L | ||||||||
| 12767051 | 12767096 | 38667 | 38712 | + | three_prime_utr | coding_transcript | ||
| 12767051 | 12767096 | 38667 | 38712 | + | three_prime_utr | coding_transcript | ||
| 12761532 | 12766669 | 39094 | 44231 | + | gene | Hip1 | coding_transcript | |
Sets
Oligos
| Name/Sequence | Export |
|---|---|
|
CG32106[37601]::S000169_fly_pretag_fwd
CACAGCAAAATGTACATTTGGATTACTATGATCAATCGGAATACCAAATTgaagtgcataccaatcaggacccgc
|
Fasta
|
|
CG32106[37601]::S000169_fly_pretag_rev
TGTTTTTAAAGTAATTTTAATTTAATGTATTCTTCCAACTGTTTGGATTActtgtcgtcgtcatccttgtagtca
|
Fasta
|