Clone: 02182476214419926 H08
Tagged gene: CG9399
Identifier: FBgn0037715
Clone | FlyFos015846(pRedFlp-Hgr)(CG9399[24019]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT |
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Library | FlyFos 5.43 D.mel in E. coli EPI300 |
Genome | Species: Drosophila melanogaster, Release: 5.43 |
Validation
Type | Status | Download / View |
---|---|---|
Grows in selection | good | |
NGS-based tag validation | good | [view] |
Genes in pFlyFos vector
Gene | Clone relative | Genome relative | |||||
---|---|---|---|---|---|---|---|
Name | Length | Start | End | Strand | Start | End | Strand |
DsRed | 716 | 8417 | 9132 | + | 8417 | 9132 | + |
Features
Start (Source) | End (Source) | Start | End | Strand | Type | Name | Source | |
---|---|---|---|---|---|---|---|---|
pFlyFos | ||||||||
1 | 107 | 1 | 107 | - | cds | LacZ | epicentre | |
4 | 21 | 4 | 21 | - | primer_bind | CC2_rev | epicentre | |
310 | 593 | 310 | 593 | + | misc_recomb | attB | epicentre | |
727 | 1386 | 727 | 1386 | - | cds | Cat | epicentre | |
1605 | 1952 | 1605 | 1952 | + | cds | redF | epicentre | |
2336 | 2953 | 2336 | 2953 | + | rep_origin | oriV | epicentre | |
2953 | 3007 | 2953 | 3007 | + | rep_origin | ori2 | epicentre | |
3347 | 4102 | 3347 | 4102 | + | cds | repE | epicentre | |
4681 | 5856 | 4681 | 5856 | + | cds | parA | epicentre | |
5856 | 6827 | 5856 | 6827 | + | cds | parB | epicentre | |
6900 | 7417 | 6900 | 7417 | + | repeat_region | parC | epicentre | |
7633 | 8031 | 7633 | 8031 | + | misc_binding | cos | epicentre | |
8049 | 8082 | 8049 | 8082 | + | misc_recomb | loxP | epicentre | |
8182 | 8416 | 8182 | 8416 | + | promoter | 3xP3 | epicentre | |
8417 | 9132 | 8417 | 9132 | + | gene | DsRed | epicentre | |
8452 | 9132 | 8452 | 9132 | + | cds | DsRed | epicentre | |
9284 | 9334 | 9284 | 9334 | + | terminator | SV40 | epicentre | |
9408 | 9630 | 9408 | 9630 | - | cds | LacZ | epicentre | |
9559 | 9576 | 9559 | 9576 | + | primer_bind | T7 | epicentre | |
9610 | 9627 | 9610 | 9627 | + | primer_bind | CC2_fwd | epicentre | |
dmel-5.43-3R | ||||||||
5385487 | 5387255 | 11285 | 13053 | + | gene | MBD-like | coding_transcript | |
5387302 | 5389392 | 13100 | 15190 | - | gene | CG9393 | coding_transcript | |
5389703 | 5391814 | 15501 | 17612 | + | gene | Vps45 | coding_transcript | |
5391946 | 5394911 | 17744 | 20709 | + | gene | CG16789 | coding_transcript | |
5394796 | 5395936 | 20594 | 21734 | - | gene | CG16790 | coding_transcript | |
5396133 | 5397345 | 21931 | 23143 | - | gene | CG9396 | coding_transcript | |
5397633 | 5399927 | 23431 | 26787 | - | gene | CG9399 | coding_transcript | |
5397633 | 5399927 | 23431 | 26787 | - | mrna | FBtr0302332 | coding_transcript | |
5397633 | 5399335 | 23431 | 26195 | - | mrna | FBtr0082110 | coding_transcript | |
5397633 | 5398476 | 23431 | 25336 | - | exon | coding_transcript | ||
5397633 | 5398476 | 23431 | 25336 | - | exon | coding_transcript | ||
5397633 | 5398218 | 23431 | 24016 | - | three_prime_utr | coding_transcript | ||
5397633 | 5398218 | 23431 | 24016 | - | three_prime_utr | coding_transcript | ||
5397936 | 5399708 | 23734 | 26568 | - | mrna | FBtr0082109 | coding_transcript | |
5397936 | 5398476 | 23734 | 25336 | - | exon | coding_transcript | ||
5397936 | 5398218 | 23734 | 24016 | - | three_prime_utr | coding_transcript | ||
5398219 | 5398476 | 24017 | 25336 | - | cds | coding_transcript | ||
5398219 | 5398476 | 24017 | 25336 | - | cds | coding_transcript | ||
5398219 | 5398476 | 24017 | 25336 | - | cds | coding_transcript | ||
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG | ||||||||
2437 | 2470 | 24093 | 24126 | - | misc_recomb | FRT | CLC | |
2358 | 2429 | 24134 | 24205 | - | cds | BLRP | CLC | |
2337 | 2357 | 24206 | 24226 | - | cds | TEV | CLC | |
2313 | 2336 | 24227 | 24250 | - | cds | Precision cut site | CLC | |
2271 | 2312 | 24251 | 24292 | - | cds | V5 | CLC | |
1548 | 2264 | 24299 | 25015 | - | cds | SGFP | CLC | |
1482 | 1541 | 25022 | 25081 | - | cds | 2xTY1 | CLC | |
dmel-5.43-3R | ||||||||
5398477 | 5398970 | 25337 | 25830 | - | intron | coding_transcript | ||
5398477 | 5398970 | 25337 | 25830 | - | intron | coding_transcript | ||
5398477 | 5398970 | 25337 | 25830 | - | intron | coding_transcript | ||
5398971 | 5399011 | 25831 | 25871 | - | exon | coding_transcript | ||
5398971 | 5399011 | 25831 | 25871 | - | cds | coding_transcript | ||
5398971 | 5399011 | 25831 | 25871 | - | exon | coding_transcript | ||
5398971 | 5399011 | 25831 | 25871 | - | cds | coding_transcript | ||
5398971 | 5399011 | 25831 | 25871 | - | exon | coding_transcript | ||
5398971 | 5399011 | 25831 | 25871 | - | cds | coding_transcript | ||
5399012 | 5399075 | 25872 | 25935 | - | intron | coding_transcript | ||
5399012 | 5399075 | 25872 | 25935 | - | intron | coding_transcript | ||
5399012 | 5399075 | 25872 | 25935 | - | intron | coding_transcript | ||
5399076 | 5399335 | 25936 | 26195 | - | exon | coding_transcript | ||
5399076 | 5399317 | 25936 | 26177 | - | exon | coding_transcript | ||
5399076 | 5399317 | 25936 | 26177 | - | exon | coding_transcript | ||
5399076 | 5399241 | 25936 | 26101 | - | cds | coding_transcript | ||
5399076 | 5399241 | 25936 | 26101 | - | cds | coding_transcript | ||
5399076 | 5399241 | 25936 | 26101 | - | cds | coding_transcript | ||
5399242 | 5399335 | 26102 | 26195 | - | five_prime_utr | coding_transcript | ||
5399242 | 5399317 | 26102 | 26177 | - | five_prime_utr | coding_transcript | ||
5399242 | 5399317 | 26102 | 26177 | - | five_prime_utr | coding_transcript | ||
5399318 | 5399863 | 26178 | 26723 | - | intron | coding_transcript | ||
5399318 | 5399524 | 26178 | 26384 | - | intron | coding_transcript | ||
5399525 | 5399708 | 26385 | 26568 | - | exon | coding_transcript | ||
5399525 | 5399708 | 26385 | 26568 | - | five_prime_utr | coding_transcript | ||
5399864 | 5399927 | 26724 | 26787 | - | exon | coding_transcript | ||
5399864 | 5399927 | 26724 | 26787 | - | five_prime_utr | coding_transcript | ||
5400206 | 5403506 | 27066 | 30366 | - | gene | Kap-alpha3 | coding_transcript | |
5403680 | 5406947 | 30540 | 33807 | + | gene | CG8273 | coding_transcript | |
5407034 | 5412370 | 33894 | 39230 | + | gene | CG8301 | coding_transcript | |
5408237 | 5408944 | 35097 | 35804 | - | gene | CG33654 | coding_transcript | |
5412661 | 5415303 | 39521 | 42163 | + | gene | P58IPK | coding_transcript | |
5415190 | 5416709 | 42050 | 43569 | - | gene | bocksbeutel | coding_transcript |
Sets
Oligos
Name/Sequence | Export |
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CG9399[24019]::S000169_fly_pretag_fwd
AGAGTCAGGAGAAGCTGAAGCAGGAGCAGCAGCAGCCGGCGGTGCAAAATgaagtgcataccaatcaggacccgc
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CG9399[24019]::S000169_fly_pretag_rev
AAAGTCTATATAAAGGGGACAGCACCGGTATTCGATTCGATATGTATCTActtgtcgtcgtcatccttgtagtca
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