Clone: 02182476214419926 H08

Tagged gene: CG9399
Identifier: FBgn0037715

Clone FlyFos015846(pRedFlp-Hgr)(CG9399[24019]::S000169_fly_pretag)::2XTY1-SGFP-V5-preTEV-BLRP-3XFLAGdFRT
Library FlyFos 5.43 D.mel in E. coli EPI300
Genome Species: Drosophila melanogaster, Release: 5.43

Validation

Type Status Download / View
Grows in selection good
NGS-based tag validation good [view]

Genes in pFlyFos vector

Gene Clone relative Genome relative
Name Length Start End Strand Start End Strand
DsRed 716 8417 9132 + 8417 9132 +

Features

Start (Source) End (Source) Start End Strand Type Name Source
pFlyFos
1 107 1 107 - cds LacZ epicentre
4 21 4 21 - primer_bind CC2_rev epicentre
310 593 310 593 + misc_recomb attB epicentre
727 1386 727 1386 - cds Cat epicentre
1605 1952 1605 1952 + cds redF epicentre
2336 2953 2336 2953 + rep_origin oriV epicentre
2953 3007 2953 3007 + rep_origin ori2 epicentre
3347 4102 3347 4102 + cds repE epicentre
4681 5856 4681 5856 + cds parA epicentre
5856 6827 5856 6827 + cds parB epicentre
6900 7417 6900 7417 + repeat_region parC epicentre
7633 8031 7633 8031 + misc_binding cos epicentre
8049 8082 8049 8082 + misc_recomb loxP epicentre
8182 8416 8182 8416 + promoter 3xP3 epicentre
8417 9132 8417 9132 + gene DsRed epicentre
8452 9132 8452 9132 + cds DsRed epicentre
9284 9334 9284 9334 + terminator SV40 epicentre
9408 9630 9408 9630 - cds LacZ epicentre
9559 9576 9559 9576 + primer_bind T7 epicentre
9610 9627 9610 9627 + primer_bind CC2_fwd epicentre
dmel-5.43-3R
5385487 5387255 11285 13053 + gene MBD-like coding_transcript
5387302 5389392 13100 15190 - gene CG9393 coding_transcript
5389703 5391814 15501 17612 + gene Vps45 coding_transcript
5391946 5394911 17744 20709 + gene CG16789 coding_transcript
5394796 5395936 20594 21734 - gene CG16790 coding_transcript
5396133 5397345 21931 23143 - gene CG9396 coding_transcript
5397633 5399927 23431 26787 - gene CG9399 coding_transcript
5397633 5399927 23431 26787 - mrna FBtr0302332 coding_transcript
5397633 5399335 23431 26195 - mrna FBtr0082110 coding_transcript
5397633 5398476 23431 25336 - exon coding_transcript
5397633 5398476 23431 25336 - exon coding_transcript
5397633 5398218 23431 24016 - three_prime_utr coding_transcript
5397633 5398218 23431 24016 - three_prime_utr coding_transcript
5397936 5399708 23734 26568 - mrna FBtr0082109 coding_transcript
5397936 5398476 23734 25336 - exon coding_transcript
5397936 5398218 23734 24016 - three_prime_utr coding_transcript
5398219 5398476 24017 25336 - cds coding_transcript
5398219 5398476 24017 25336 - cds coding_transcript
5398219 5398476 24017 25336 - cds coding_transcript
p2XTY1-SGFP-V5-preTEV-BLRP-3XFLAG
2437 2470 24093 24126 - misc_recomb FRT CLC
2358 2429 24134 24205 - cds BLRP CLC
2337 2357 24206 24226 - cds TEV CLC
2313 2336 24227 24250 - cds Precision cut site CLC
2271 2312 24251 24292 - cds V5 CLC
1548 2264 24299 25015 - cds SGFP CLC
1482 1541 25022 25081 - cds 2xTY1 CLC
dmel-5.43-3R
5398477 5398970 25337 25830 - intron coding_transcript
5398477 5398970 25337 25830 - intron coding_transcript
5398477 5398970 25337 25830 - intron coding_transcript
5398971 5399011 25831 25871 - exon coding_transcript
5398971 5399011 25831 25871 - cds coding_transcript
5398971 5399011 25831 25871 - exon coding_transcript
5398971 5399011 25831 25871 - cds coding_transcript
5398971 5399011 25831 25871 - exon coding_transcript
5398971 5399011 25831 25871 - cds coding_transcript
5399012 5399075 25872 25935 - intron coding_transcript
5399012 5399075 25872 25935 - intron coding_transcript
5399012 5399075 25872 25935 - intron coding_transcript
5399076 5399335 25936 26195 - exon coding_transcript
5399076 5399317 25936 26177 - exon coding_transcript
5399076 5399317 25936 26177 - exon coding_transcript
5399076 5399241 25936 26101 - cds coding_transcript
5399076 5399241 25936 26101 - cds coding_transcript
5399076 5399241 25936 26101 - cds coding_transcript
5399242 5399335 26102 26195 - five_prime_utr coding_transcript
5399242 5399317 26102 26177 - five_prime_utr coding_transcript
5399242 5399317 26102 26177 - five_prime_utr coding_transcript
5399318 5399863 26178 26723 - intron coding_transcript
5399318 5399524 26178 26384 - intron coding_transcript
5399525 5399708 26385 26568 - exon coding_transcript
5399525 5399708 26385 26568 - five_prime_utr coding_transcript
5399864 5399927 26724 26787 - exon coding_transcript
5399864 5399927 26724 26787 - five_prime_utr coding_transcript
5400206 5403506 27066 30366 - gene Kap-alpha3 coding_transcript
5403680 5406947 30540 33807 + gene CG8273 coding_transcript
5407034 5412370 33894 39230 + gene CG8301 coding_transcript
5408237 5408944 35097 35804 - gene CG33654 coding_transcript
5412661 5415303 39521 42163 + gene P58IPK coding_transcript
5415190 5416709 42050 43569 - gene bocksbeutel coding_transcript

Sets

Oligos

Name/Sequence Export
CG9399[24019]::S000169_fly_pretag_fwd
AGAGTCAGGAGAAGCTGAAGCAGGAGCAGCAGCAGCCGGCGGTGCAAAATgaagtgcataccaatcaggacccgc
fasta Fasta
CG9399[24019]::S000169_fly_pretag_rev
AAAGTCTATATAAAGGGGACAGCACCGGTATTCGATTCGATATGTATCTActtgtcgtcgtcatccttgtagtca
fasta Fasta